An improved genome assembly uncovers prolific tandem repeats in Atlantic cod
about
Whole genome sequencing data and de novo draft assemblies for 66 teleost speciesHighly localized divergence within supergenes in Atlantic cod (Gadus morhua) within the Gulf of Maine.Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation.Ancient DNA reveals the Arctic origin of Viking Age cod from Haithabu, Germany.HINGE: long-read assembly achieves optimal repeat resolution.Hybrid assembly with long and short reads improves discovery of gene family expansions.Genome assembly of the Pink Ipê (Handroanthus impetiginosus, Bignoniaceae), a highly-valued ecologically keystone Neotropical timber forest tree.Single-molecule sequencing and optical mapping yields an improved genome of woodland strawberry (Fragaria vesca) with chromosome-scale contiguity.BUSCO applications from quality assessments to gene prediction and phylogenomics.De novo gene evolution of antifreeze glycoproteins in codfishes revealed by whole genome sequence data.Ancient chromosomal rearrangement associated with local adaptation of a post-glacially colonized population of Atlantic Cod in the northwest Atlantic.Genome architecture enables local adaptation of Atlantic cod despite high connectivity.Vertebrate Genome Evolution in the Light of Fish Cytogenomics and rDNAomics.Loss of stomach, loss of appetite? Sequencing of the ballan wrasse (Labrus bergylta) genome and intestinal transcriptomic profiling illuminate the evolution of loss of stomach function in fish.Linking species habitat and past palaeoclimatic events to evolution of the teleost innate immune system.Genomic architecture of haddock (Melanogrammus aeglefinus) shows expansions of innate immune genes and short tandem repeats.Population-scale whole genome sequencing identifies 271 highly polymorphic short tandem repeats from Japanese population.Mitochondrial genome variation of Atlantic cod.Analysis of coastal cod (Gadus morhua L.) sampled on spawning sites reveals a genetic gradient throughout Norway's coastline.Stable coexistence of genetically divergent Atlantic cod ecotypes at multiple spatial scales
P2860
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P2860
An improved genome assembly uncovers prolific tandem repeats in Atlantic cod
description
2017 nî lūn-bûn
@nan
2017年の論文
@ja
2017年論文
@yue
2017年論文
@zh-hant
2017年論文
@zh-hk
2017年論文
@zh-mo
2017年論文
@zh-tw
2017年论文
@wuu
2017年论文
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2017年论文
@zh-cn
name
An improved genome assembly uncovers prolific tandem repeats in Atlantic cod
@ast
An improved genome assembly uncovers prolific tandem repeats in Atlantic cod
@en
type
label
An improved genome assembly uncovers prolific tandem repeats in Atlantic cod
@ast
An improved genome assembly uncovers prolific tandem repeats in Atlantic cod
@en
prefLabel
An improved genome assembly uncovers prolific tandem repeats in Atlantic cod
@ast
An improved genome assembly uncovers prolific tandem repeats in Atlantic cod
@en
P2093
P2860
P50
P1433
P1476
An improved genome assembly uncovers prolific tandem repeats in Atlantic cod
@en
P2093
Ave Tooming-Klunderud
Brian P Walenz
Harald Grove
James Knight
Jenny M Ekholm
Kjetill S Jakobsen
Morten Skage
Paul Peluso
Rolf B Edvardsen
Sigbjørn Lien
P2860
P2888
P356
10.1186/S12864-016-3448-X
P407
P577
2017-01-18T00:00:00Z
P6179
1022796849