Locally accessible conformations of proteins: multiple molecular dynamics simulations of crambin.
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Energy landscape of a peptide consisting of alpha-helix, 3(10)-helix, beta-turn, beta-hairpin, and other disordered conformationsOmpT: molecular dynamics simulations of an outer membrane enzymeElucidating the inhibition mechanism of HIV-1 non-nucleoside reverse transcriptase inhibitors through multicopy molecular dynamics simulationsUnraveling low-resolution structural data of large biomolecules by constructing atomic models with experiment-targeted parallel cascade selection simulations.Convergence and reproducibility in molecular dynamics simulations of the DNA duplex d(GCACGAACGAACGAACGC)Conformational sampling and nucleotide-dependent transitions of the GroEL subunit probed by unbiased molecular dynamics simulationsDiscovering conformational sub-states relevant to protein functionUsing Ligand-Mapping Simulations to Design a Ligand Selectively Targeting a Cryptic Surface Pocket of Polo-Like Kinase 1Accurate de novo design of hyperstable constrained peptidesHuman aldehyde dehydrogenase catalytic activity and structural interactions with coenzyme analogsAn acidic loop and cognate phosphorylation sites define a molecular switch that modulates ubiquitin charging activity in Cdc34-like enzymesIdentification of potential small molecule binding pockets on Rho family GTPasesA model of lipid-free apolipoprotein A-I revealed by iterative molecular dynamics simulationUnderstanding the basis of a class of paradoxical mutations in AraC through simulationsStructural features of cholesteryl ester transfer protein: a molecular dynamics simulation studyFluctuations and correlations in crystalline protein dynamics: a simulation analysis of staphylococcal nucleaseConformational sampling and dynamics of membrane proteins from 10-nanosecond computer simulations.OmpA: a pore or not a pore? Simulation and modeling studies.Collective motions of rigid fragments in protein structures from smoothed electron density distributions.Bhageerath-H: a homology/ab initio hybrid server for predicting tertiary structures of monomeric soluble proteins.Prediction of the structures of helical membrane proteins based on a minimum unfavorable contacts approach.Computational identification of slow conformational fluctuations in proteinsComparing pharmacophore models derived from crystal structures and from molecular dynamics simulationsMechanism of 150-cavity formation in influenza neuraminidase.Protein Structure Refinement through Structure Selection and Averaging from Molecular Dynamics Ensembles.Physics-based protein structure refinement through multiple molecular dynamics trajectories and structure averaging.Molecular dynamics modeling of the sub-THz vibrational absorption of thioredoxin from E. coli.A model of calcium activation of the cardiac thin filamentStructure and dynamics of the pore-lining helix of the nicotinic receptor: MD simulations in water, lipid bilayers, and transbilayer bundles.Integrating protein structural dynamics and evolutionary analysis with Bio3D.Helix motion in protein C12A-p8(MTCP1): comparison of molecular dynamics simulations and multifield NMR relaxation data.Dynamics of Ca2+-saturated calmodulin D129N mutant studied by multiple molecular dynamics simulations.Convergence in peptide folding simulation: multiple trajectories of a potential AIDS pharmacophore.Molecular dynamics of mesophilic-like mutants of a cold-adapted enzyme: insights into distal effects induced by the mutationsAmplitudes and directions of internal protein motions from a JAM analysis of 15N relaxation data.Novel acetylcholinesterase target site for malaria mosquito control.Normal-mode-analysis-monitored energy minimization procedure for generating small-molecule bound conformations.Can molecular dynamics simulations help in discriminating correct from erroneous protein 3D models?Modeling structure and flexibility of Candida antarctica lipase B in organic solvents.NMR and MD investigations of human galectin-1/oligosaccharide complexes
P2860
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P2860
Locally accessible conformations of proteins: multiple molecular dynamics simulations of crambin.
description
1998 nî lūn-bûn
@nan
1998年の論文
@ja
1998年学术文章
@wuu
1998年学术文章
@zh-cn
1998年学术文章
@zh-hans
1998年学术文章
@zh-my
1998年学术文章
@zh-sg
1998年學術文章
@yue
1998年學術文章
@zh
1998年學術文章
@zh-hant
name
Locally accessible conformatio ...... namics simulations of crambin.
@ast
Locally accessible conformatio ...... namics simulations of crambin.
@en
type
label
Locally accessible conformatio ...... namics simulations of crambin.
@ast
Locally accessible conformatio ...... namics simulations of crambin.
@en
prefLabel
Locally accessible conformatio ...... namics simulations of crambin.
@ast
Locally accessible conformatio ...... namics simulations of crambin.
@en
P2093
P2860
P356
P1433
P1476
Locally accessible conformatio ...... namics simulations of crambin.
@en
P2093
P2860
P304
P356
10.1002/PRO.5560070314
P577
1998-03-01T00:00:00Z