Multidimensional annotation of the Escherichia coli K-12 genome.
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Annotation error in public databases: misannotation of molecular function in enzyme superfamiliesA protocol for generating a high-quality genome-scale metabolic reconstructionPathway Tools version 13.0: integrated software for pathway/genome informatics and systems biology.The incoherent feed-forward loop can generate non-monotonic input functions for genesElucidation of primary metabolic pathways in Aspergillus species: orphaned research in characterizing orphan genes.Identifying cognate binding pairs among a large set of paralogs: the case of PE/PPE proteins of Mycobacterium tuberculosisGenetic architecture of intrinsic antibiotic susceptibilityHigh-throughput phenotypic characterization of Pseudomonas aeruginosa membrane transport genesThe Escherichia coli phosphotyrosine proteome relates to core pathways and virulenceConsistency Analysis of Genome-Scale Models of Bacterial Metabolism: A Metamodel ApproachWhat we can learn about Escherichia coli through application of Gene OntologyMetabolic engineering of Escherichia coli for efficient conversion of glycerol to ethanolAbsolute metabolite concentrations and implied enzyme active site occupancy in Escherichia coliReconstruction of biochemical networks in microorganismsExploring the structure and function paradigm.LeishCyc: a biochemical pathways database for Leishmania major.In vivo application of photocleavable protein interaction reporter technology.Directional RNA-seq reveals highly complex condition-dependent transcriptomes in E. coli K12 through accurate full-length transcripts assembling.Comparative genomics-based investigation of resequencing targets in Vibrio fischeri: focus on point miscalls and artefactual expansionsNetwork evaluation from the consistency of the graph structure with the measured data.The National Center for Biotechnology Information's Protein Clusters Database.Matching curated genome databases: a non trivial task.Gene set analyses for interpreting microarray experiments on prokaryotic organisms.Genome-scale models of bacterial metabolism: reconstruction and applications.In silico prioritisation of candidate genes for prokaryotic gene function discovery: an application of phylogenetic profiles.Global effect of RpoS on gene expression in pathogenic Escherichia coli O157:H7 strain EDL933E Unibus Plurum: genomic analysis of an experimentally evolved polymorphism in Escherichia coli.A geographically-diverse collection of 418 human gut microbiome pathway genome databases.eCAMBer: efficient support for large-scale comparative analysis of multiple bacterial strains.Representing ontogeny through ontology: a developmental biologist's guide to the gene ontologyGenomic and transcriptomic landscape of Escherichia coli BL21(DE3)Analog regulation of metabolic demand.Novel reference genes for quantifying transcriptional responses of Escherichia coli to protein overexpression by quantitative PCRDeletion of genes encoding cytochrome oxidases and quinol monooxygenase blocks the aerobic-anaerobic shift in Escherichia coli K-12 MG1655.Dynamics of genome evolution in facultative symbionts of aphidsEcoCyc: fusing model organism databases with systems biology.The EcoCyc Database.Hamiltonella defensa, genome evolution of protective bacterial endosymbiont from pathogenic ancestorsDead end metabolites--defining the known unknowns of the E. coli metabolic networkSolving gap metabolites and blocked reactions in genome-scale models: application to the metabolic network of Blattabacterium cuenoti.
P2860
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P2860
Multidimensional annotation of the Escherichia coli K-12 genome.
description
2007 nî lūn-bûn
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2007年の論文
@ja
2007年学术文章
@wuu
2007年学术文章
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2007年学术文章
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2007年学术文章
@zh-my
2007年学术文章
@zh-sg
2007年學術文章
@yue
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2007年學術文章
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name
Multidimensional annotation of the Escherichia coli K-12 genome.
@ast
Multidimensional annotation of the Escherichia coli K-12 genome.
@en
type
label
Multidimensional annotation of the Escherichia coli K-12 genome.
@ast
Multidimensional annotation of the Escherichia coli K-12 genome.
@en
prefLabel
Multidimensional annotation of the Escherichia coli K-12 genome.
@ast
Multidimensional annotation of the Escherichia coli K-12 genome.
@en
P2093
P2860
P50
P356
P1476
Multidimensional annotation of the Escherichia coli K-12 genome.
@en
P2093
Alexander Shearer
César Bonavides-Martinez
Ingrid M Keseler
John Ingraham
Mario Latendresse
Markus Krummenacker
Mónica I Peñaloza-Spínola
Socorro Gama-Castro
Suzanne M Paley
P2860
P304
P356
10.1093/NAR/GKM740
P407
P577
2007-10-16T00:00:00Z