ConStrains identifies microbial strains in metagenomic datasets.
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Tracking Strains in the Microbiome: Insights from Metagenomics and ModelsThe Challenge and Potential of Metagenomics in the ClinicBeyond 16S rRNA Community Profiling: Intra-Species Diversity in the Gut MicrobiotaStrain-level dissection of the contribution of the gut microbiome to human metabolic diseaseToward Accurate and Quantitative Comparative MetagenomicsInferring phage-bacteria infection networks from time-series dataMetaSort untangles metagenome assembly by reducing microbial community complexityThe single-species metagenome: subtyping Staphylococcus aureus core genome sequences from shotgun metagenomic data.Variable-order sequence modeling improves bacterial strain discrimination for Ion Torrent DNA reads.Roles for Intestinal Bacteria, Viruses, and Fungi in Pathogenesis of Inflammatory Bowel Diseases and Therapeutic Approaches.A method for high precision sequencing of near full-length 16S rRNA genes on an Illumina MiSeq.The role of the intestinal microbiota in type 1 diabetes mellitus.Variation in Microbiome LPS Immunogenicity Contributes to Autoimmunity in Humans.Gut microbiota, metabolites and host immunity.A bit of a mouthful.Bioinformatics tools for quantitative and functional metagenome and metatranscriptome data analysis in microbes.Metatranscriptomic evidence of pervasive and diverse chemolithoautotrophy relevant to C, S, N and Fe cycling in a shallow alluvial aquifer.Natural history of the infant gut microbiome and impact of antibiotic treatment on bacterial strain diversity and stabilityAn integrated metagenomics pipeline for strain profiling reveals novel patterns of bacterial transmission and biogeography.Metagenomics of Two Severe Foodborne Outbreaks Provides Diagnostic Signatures and Signs of Coinfection Not Attainable by Traditional MethodsThe Source and Evolutionary History of a Microbial Contaminant Identified Through Soil Metagenomic Analysis.Identical bacterial populations colonize premature infant gut, skin, and oral microbiomes and exhibit different in situ growth ratesMicrobial strain-level population structure and genetic diversity from metagenomes.metaSNV: A tool for metagenomic strain level analysisShaping of cutaneous function by encounters with commensals.High-resolution characterization of the human microbiome.Shotgun metagenomics, from sampling to analysis.Toward a Metagenomic Understanding on the Bacterial Composition and Resistome in Hong Kong Banknotes.Comprehensive benchmarking and ensemble approaches for metagenomic classifiers.DESMAN: a new tool for de novo extraction of strains from metagenomes.Exciting strain-level resolution studies of the food microbiome.MetaGen: reference-free learning with multiple metagenomic samplesAbundance estimation and differential testing on strain level in metagenomics data.Strains, functions and dynamics in the expanded Human Microbiome Project.Subspecies in the global human gut microbiome.Metagenomic binning and association of plasmids with bacterial host genomes using DNA methylation.Experimental design and quantitative analysis of microbial community multiomics.Strain profiling and epidemiology of bacterial species from metagenomic sequencing.Recovery of nearly 8,000 metagenome-assembled genomes substantially expands the tree of life.Genetic risk, dysbiosis, and treatment stratification using host genome and gut microbiome in inflammatory bowel disease.
P2860
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P2860
ConStrains identifies microbial strains in metagenomic datasets.
description
2015 nî lūn-bûn
@nan
2015年の論文
@ja
2015年学术文章
@wuu
2015年学术文章
@zh-cn
2015年学术文章
@zh-hans
2015年学术文章
@zh-my
2015年学术文章
@zh-sg
2015年學術文章
@yue
2015年學術文章
@zh
2015年學術文章
@zh-hant
name
ConStrains identifies microbial strains in metagenomic datasets.
@ast
ConStrains identifies microbial strains in metagenomic datasets.
@en
type
label
ConStrains identifies microbial strains in metagenomic datasets.
@ast
ConStrains identifies microbial strains in metagenomic datasets.
@en
prefLabel
ConStrains identifies microbial strains in metagenomic datasets.
@ast
ConStrains identifies microbial strains in metagenomic datasets.
@en
P2860
P50
P356
P1433
P1476
ConStrains identifies microbial strains in metagenomic datasets.
@en
P2093
Chengwei Luo
Ramnik J Xavier
P2860
P2888
P304
P356
10.1038/NBT.3319
P577
2015-09-07T00:00:00Z