Enhanced automated function prediction using distantly related sequences and contextual association by PFP.
about
Testing the ortholog conjecture with comparative functional genomic data from mammalsBlast2GO: A comprehensive suite for functional analysis in plant genomicsA large-scale evaluation of computational protein function predictionHigh-throughput functional annotation and data mining with the Blast2GO suiteProtein function prediction: towards integration of similarity metrics.ESG: extended similarity group method for automated protein function predictionParadoxical DNA repair and peroxide resistance gene conservation in Bacillus pumilus SAFR-032GASdb: a large-scale and comparative exploration database of glycosyl hydrolysis systemsSequence-based feature prediction and annotation of proteinsEXIA2: web server of accurate and rapid protein catalytic residue prediction.Exploring the structure and function paradigm.Quantification of protein group coherence and pathway assignment using functional association.The PFP and ESG protein function prediction methods in 2014: effect of database updates and ensemble approaches.BLAST-based structural annotation of protein residues using Protein Data Bank.Functional representation of enzymes by specific peptides.Subtle genetic changes enhance virulence of methicillin resistant and sensitive Staphylococcus aureusLocal function conservation in sequence and structure spaceStructure-guided comparative analysis of proteins: principles, tools, and applications for predicting function.Rapid annotation of anonymous sequences from genome projects using semantic similarities and a weighting scheme in gene ontology.High-level chromate resistance in Arthrobacter sp. strain FB24 requires previously uncharacterized accessory genes.Functional enrichment analyses and construction of functional similarity networks with high confidence function prediction by PFP.GOPred: GO molecular function prediction by combined classifiersProteomic analysis of the Plasmodium male gamete reveals the key role for glycolysis in flagellar motility.BLANNOTATOR: enhanced homology-based function prediction of bacterial proteinsA novel neural response algorithm for protein function prediction.Real-time ligand binding pocket database search using local surface descriptorsEvaluation of function predictions by PFP, ESG,and PSI-BLAST for moonlighting proteins.Identification and analysis of potential targets in Streptococcus sanguinis using computer aided protein data analysis.Concomitant prediction of function and fold at the domain level with GO-based profilesIn-depth performance evaluation of PFP and ESG sequence-based function prediction methods in CAFA 2011 experimentHomology-based inference sets the bar high for protein function predictionBioinformatics analysis identify novel OB fold protein coding genes in C. elegans.PFP/ESG: automated protein function prediction servers enhanced with Gene Ontology visualization tool.Lactobacillus reuteri-specific immunoregulatory gene rsiR modulates histamine production and immunomodulation by Lactobacillus reuteriGenome-scale identification and characterization of moonlighting proteins.Measuring semantic similarities by combining gene ontology annotations and gene co-function networks.Biochemical functional predictions for protein structures of unknown or uncertain functionGenome-scale phylogenetic function annotation of large and diverse protein familiesSIFTER search: a web server for accurate phylogeny-based protein function predictionfirestar--prediction of functionally important residues using structural templates and alignment reliability.
P2860
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P2860
Enhanced automated function prediction using distantly related sequences and contextual association by PFP.
description
2006 nî lūn-bûn
@nan
2006年の論文
@ja
2006年学术文章
@wuu
2006年学术文章
@zh-cn
2006年学术文章
@zh-hans
2006年学术文章
@zh-my
2006年学术文章
@zh-sg
2006年學術文章
@yue
2006年學術文章
@zh
2006年學術文章
@zh-hant
name
Enhanced automated function pr ...... contextual association by PFP.
@ast
Enhanced automated function pr ...... contextual association by PFP.
@en
type
label
Enhanced automated function pr ...... contextual association by PFP.
@ast
Enhanced automated function pr ...... contextual association by PFP.
@en
prefLabel
Enhanced automated function pr ...... contextual association by PFP.
@ast
Enhanced automated function pr ...... contextual association by PFP.
@en
P2860
P356
P1433
P1476
Enhanced automated function pr ...... contextual association by PFP.
@en
P2093
Stanislav Luban
Troy Hawkins
P2860
P304
P356
10.1110/PS.062153506
P577
2006-05-02T00:00:00Z