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Methods for kinetic and thermodynamic analysis of aminoacyl-tRNA synthetases

Methods for kinetic and thermodynamic analysis of aminoacyl-tRNA synthetases

http://www.wikidata.org/entity/Q36528700

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Homologs of aminoacyl-tRNA synthetases acylate carrier proteins and provide a link between ribosomal and nonribosomal peptide synthesis Leucyl-tRNA synthetase editing domain functions as a molecular rheostat to control codon ambiguity in Mycoplasma pathogens Plant tumour biocontrol agent employs a tRNA-dependent mechanism to inhibit leucyl-tRNA synthetase Analogs of natural aminoacyl-tRNA synthetase inhibitors clear malaria in vivo Genetic mapping and exome sequencing identify variants associated with five novel diseases RNA-assisted catalysis in a protein enzyme: The 2'-hydroxyl of tRNA(Thr) A76 promotes aminoacylation by threonyl-tRNA synthetase Sub-Cellular Localization and Complex Formation by Aminoacyl-tRNA Synthetases in Cyanobacteria: Evidence for Interaction of Membrane-Anchored ValRS with ATP Synthase Genes adopt non-optimal codon usage to generate cell cycle-dependent oscillations in protein levels Adenylation enzyme characterization using gamma -(18)O(4)-ATP pyrophosphate exchange.tRNA-dependent pre-transfer editing by prokaryotic leucyl-tRNA synthetase.Severe oxidative stress induces protein mistranslation through impairment of an aminoacyl-tRNA synthetase editing site.An Ancestral Tryptophanyl-tRNA Synthetase Precursor Achieves High Catalytic Rate Enhancement without Ordered Ground-State Tertiary Structures.Reduced amino acid specificity of mammalian tyrosyl-tRNA synthetase is associated with elevated mistranslation of Tyr codons.Characterization of aminoacyl-tRNA synthetase stability and substrate interaction by differential scanning fluorimetry.Performance analysis of orthogonal pairs designed for an expanded eukaryotic genetic code.Coordination of tRNA synthetase active sites for chemical fidelity Tryptophanyl-tRNA synthetase Urzyme: a model to recapitulate molecular evolution and investigate intramolecular complementation An archaeal tRNA-synthetase complex that enhances aminoacylation under extreme conditions.Histidyl-tRNA synthetase urzymes: Class I and II aminoacyl tRNA synthetase urzymes have comparable catalytic activities for cognate amino acid activation.Fidelity escape by the unnatural amino acid β-hydroxynorvaline: an efficient substrate for Escherichia coli threonyl-tRNA synthetase with toxic effects on growth.Recoding aminoacyl-tRNA synthetases for synthetic biology by rational protein-RNA engineering.Defects in transient tRNA translocation bypass tRNA synthetase quality control mechanisms.PylSn and the homologous N-terminal domain of pyrrolysyl-tRNA synthetase bind the tRNA that is essential for the genetic encoding of pyrrolysine Improving target amino acid selectivity in a permissive aminoacyl tRNA synthetase through counter-selection.Selective Inhibition of Bacterial Tryptophanyl-tRNA Synthetases by Indolmycin Is Mechanism-based.Archaeal Inorganic Pyrophosphatase Displays Robust Activity under High-Salt Conditions and in Organic Solvents.A spectrophotometric assay for quantitative measurement of aminoacyl-tRNA synthetase activity Asymmetric amino acid activation by class II histidyl-tRNA synthetase from Escherichia coli.Full implementation of the genetic code by tryptophanyl-tRNA synthetase requires intermodular coupling Strong anion-exchange fast performance liquid chromatography as a versatile tool for preparation and purification of RNA produced by in vitro transcription.Enhanced amino acid selection in fully evolved tryptophanyl-tRNA synthetase, relative to its urzyme, requires domain motion sensed by the D1 switch, a remote dynamic packing motif.Combining multi-mutant and modular thermodynamic cycles to measure energetic coupling networks in enzyme catalysis.Archaeal aminoacyl-tRNA synthetases interact with the ribosome to recycle tRNAs.The Enzymatic Paradox of Yeast Arginyl-tRNA Synthetase: Exclusive Arginine Transfer Controlled by a Flexible Mechanism of tRNA Recognition.Competition for amino acid flux among translation, growth and detoxification in bacteria.Trans-oligomerization of duplicated aminoacyl-tRNA synthetases maintains genetic code fidelity under stress.Polymerase/DNA interactions and enzymatic activity: multi-parameter analysis with electro-switchable biosurfaces.Predicting the pathogenicity of aminoacyl-tRNA synthetase mutations.Membrane anchoring of aminoacyl-tRNA synthetases by convergent acquisition of a novel protein domain.A master switch couples Mg²⁺-assisted catalysis to domain motion in B. stearothermophilus tryptophanyl-tRNA Synthetase

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P2860

Methods for kinetic and thermodynamic analysis of aminoacyl-tRNA synthetases

http://www.wikidata.org/entity/Q36528700

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Methods for kinetic and thermodynamic analysis of aminoacyl-tRNA synthetases

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Methods for kinetic and thermodynamic analysis of aminoacyl-tRNA synthetases

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Methods for kinetic and thermodynamic analysis of aminoacyl-tRNA synthetases

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Methods for kinetic and thermodynamic analysis of aminoacyl-tRNA synthetases

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Methods for kinetic and thermodynamic analysis of aminoacyl-tRNA synthetases

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Methods for kinetic and thermodynamic analysis of aminoacyl-tRNA synthetases

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Methods for kinetic and thermodynamic analysis of aminoacyl-tRNA synthetases

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Christopher S Francklyn

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Eric A First

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John J Perona

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P2860

Kinetic quality control of anticodon recognition by a eukaryotic aminoacyl-tRNA synthetase

Aminoacyl-tRNA synthetases, the genetic code, and the evolutionary process

Oligoribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates

Amino acid discrimination by a class I aminoacyl-tRNA synthetase specified by negative determinants

Overproduction and purification of native and queuine-lacking Escherichia coli tRNA(Asp). Role of the wobble base in tRNA(Asp) acylation.

Human tyrosyl-tRNA synthetase shares amino acid sequence homology with a putative cytokine

Catalysis of tyrosyl-adenylate formation by the human tyrosyl-tRNA synthetase

Comparison of the catalytic roles played by the KMSKS motif in the human and Bacillus stearothermophilus trosyl-tRNA synthetases

Using linear and non-linear regression to fit biochemical data

Mechanism of aminoacylation of tRNA. Proof of the aminoacyl adenylate pathway for the isoleucyl- and tyrosyl-tRNA synthetases from Escherichia coli K12

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