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Robust enumeration of cell subsets from tissue expression profiles

Robust enumeration of cell subsets from tissue expression profiles

http://www.wikidata.org/entity/Q36539395

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Toward understanding and exploiting tumor heterogeneity Associating cellular epigenetic models with human phenotypes Immune DNA signature of T-cell infiltration in breast tumor exomes.TLR-exosomes exhibit distinct kinetics and effector function.B-Cell and Monocyte Contribution to Systemic Lupus Erythematosus Identified by Cell-Type-Specific Differential Expression Analysis in RNA-Seq Data.Complex Sources of Variation in Tissue Expression Data: Analysis of the GTEx Lung Transcriptome Measuring intratumor heterogeneity by network entropy using RNA-seq data.A B-Cell Gene Signature Correlates With the Extent of Gluten-Induced Intestinal Injury in Celiac Disease.Transcriptional landscape of epithelial and immune cell populations revealed through FACS-seq of healthy human skin.A third generation vaccine for human visceral leishmaniasis and post kala azar dermal leishmaniasis: First-in-human trial of ChAd63-KH.Macrophage infiltration and genetic landscape of undifferentiated uterine sarcomas.Evaluation of invasive breast cancer samples using a 12-chemokine gene expression score: correlation with clinical outcomes The genomic landscape of tuberous sclerosis complex Comprehensive investigation of temporal and autism-associated cell type composition-dependent and independent gene expression changes in human brains.Benchmarking: contexts and details matter The CINSARC signature as a prognostic marker for clinical outcome in multiple neoplasms Gene expression reversal toward pre-adult levels in the aging human brain and age-related loss of cellular identity Evolving landscape of tumor molecular profiling for personalized cancer therapy: a comprehensive review.Immune cell subsets and their gene expression profiles from human PBMC isolated by Vacutainer Cell Preparation Tube (CPT™) and standard density gradient.MixChIP: a probabilistic method for cell type specific protein-DNA binding analysis.Exploiting Gene-Expression Deconvolution to Probe the Genetics of the Immune System.Profiling networks of distinct immune-cells in tumors.Patterns of Immune Infiltration in Breast Cancer and Their Clinical Implications: A Gene-Expression-Based Retrospective Study.Altered Epithelial Gene Expression in Peripheral Airways of Severe Asthma Validation of Immune Cell Modules in Multicellular Transcriptomic Data.Enumerateblood - an R package to estimate the cellular composition of whole blood from Affymetrix Gene ST gene expression profiles.Master Regulators of Oncogenic KRAS Response in Pancreatic Cancer: An Integrative Network Biology Analysis A comparison of reference-based algorithms for correcting cell-type heterogeneity in Epigenome-Wide Association Studies.Interferon signaling in ascites-associated macrophages is linked to a favorable clinical outcome in a subgroup of ovarian carcinoma patients.Comprehensive evaluation of RNA-seq quantification methods for linearity Emerging concepts in liquid biopsies Master regulators of infiltrate recruitment in autoimmune disease identified through network-based molecular deconvolution.Systematic pan-cancer analysis of tumour purity.Cancer immunotherapy: Strategies for personalization and combinatorial approaches.Neutrophils Oppose Uterine Epithelial Carcinogenesis via Debridement of Hypoxic Tumor Cells.Integrative analysis of breast cancer reveals prognostic haematopoietic activity and patient-specific immune response profiles The prognostic landscape of genes and infiltrating immune cells across human cancers Phosphatidylserine-targeting antibodies augment the anti-tumorigenic activity of anti-PD-1 therapy by enhancing immune activation and downregulating pro-oncogenic factors induced by T-cell checkpoint inhibition in murine triple-negative breast cance A transcriptome-based global map of signaling pathways in the ovarian cancer microenvironment associated with clinical outcome.Germline APOBEC3B deletion is associated with breast cancer risk in an Asian multi-ethnic cohort and with immune cell presentation.

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P2860

Robust enumeration of cell subsets from tissue expression profiles

http://www.wikidata.org/entity/Q36539395

description

2015 nî lūn-bûn

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2015年の論文

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2015年論文

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2015年論文

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2015年論文

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2015年論文

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2015年論文

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2015年论文

@wuu

2015年论文

@zh

2015年论文

@zh-cn

name

Robust enumeration of cell subsets from tissue expression profiles

@ast

Robust enumeration of cell subsets from tissue expression profiles

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type

label

Robust enumeration of cell subsets from tissue expression profiles

@ast

Robust enumeration of cell subsets from tissue expression profiles

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prefLabel

Robust enumeration of cell subsets from tissue expression profiles

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Robust enumeration of cell subsets from tissue expression profiles

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Robust enumeration of cell subsets from tissue expression profiles

@en

P2093

Chih Long Liu

http://www.w3.org/2001/XMLSchema#string

Chuong D Hoang

http://www.w3.org/2001/XMLSchema#string

Maximilian Diehn

http://www.w3.org/2001/XMLSchema#string

Weiguo Feng

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Yue Xu

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P2860

Hallmarks of Cancer: The Next Generation

A HaemAtlas: characterizing gene expression in differentiated human blood cells

Statistical significance for genomewide studies

Neutralizing tumor-promoting chronic inflammation: a magic bullet?

Optimal deconvolution of transcriptional profiling data using quadratic programming with application to complex clinical blood samples

DeconRNASeq: a statistical framework for deconvolution of heterogeneous tissue samples based on mRNA-Seq data.

Inferring tumour purity and stromal and immune cell admixture from expression data

Expression deconvolution: a reinterpretation of DNA microarray data reveals dynamic changes in cell populations

Immune response in silico (IRIS): immune-specific genes identified from a compendium of microarray expression data.

Selection of DDX5 as a novel internal control for Q-RT-PCR from microarray data using a block bootstrap re-sampling scheme

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453-457

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10.1038/NMETH.3337

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5

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12

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Aaron M. Newman

Andrew J Gentles

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2015-03-30T00:00:00Z

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25822800

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4739640

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