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On the Relationship of Protein and mRNA Dynamics in Vertebrate Embryonic Development

On the Relationship of Protein and mRNA Dynamics in Vertebrate Embryonic Development

http://www.wikidata.org/entity/Q36647454

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Expanding the genetic toolkit in Xenopus: Approaches and opportunities for human disease modeling Basal bodies in Xenopus Mass Spectrometry-Based Approaches to Understand the Molecular Basis of Memory Incorporation of non-canonical amino acids into the developing murine proteome Xenopus genomic data and browser resources.Label-free Quantification of Proteins in Single Embryonic Cells with Neural Fate in the Cleavage-Stage Frog (Xenopus laevis) Embryo using Capillary Electrophoresis Electrospray Ionization High-Resolution Mass Spectrometry (CE-ESI-HRMS).Nuclear size is sensitive to NTF2 protein levels in a manner dependent on Ran binding Neural transcription factors bias cleavage stage blastomeres to give rise to neural ectoderm.Optimization and comparison of bottom-up proteomic sample preparation for early-stage Xenopus laevis embryos High-Sensitivity Mass Spectrometry for Probing Gene Translation in Single Embryonic Cells in the Early Frog (Xenopus) Embryo.Use of Xenopus cell-free extracts to study size regulation of subcellular structures.High-throughput analysis reveals novel maternal germline RNAs crucial for primordial germ cell preservation and proper migration.What we can learn from a tadpole about ciliopathies and airway diseases: Using systems biology in Xenopus to study cilia and mucociliary epithelia.Translational profiling of retinal ganglion cell optic nerve regeneration in Xenopus laevis.The developmental proteome of Drosophila melanogaster.Transcriptomic insights into genetic diversity of protein-coding genes in X. laevis.Vertebrate Embryonic Cleavage Pattern Determination.New-generation mass spectrometry expands the toolbox of cell and developmental biology.N6-Methyladenosine Sequencing Highlights the Involvement of mRNA Methylation in Oocyte Meiotic Maturation and Embryo Development by Regulating Translation in Xenopus laevis.Genome-wide analysis of dorsal and ventral transcriptomes of the Xenopus laevis gastrula.Leapfrogging: primordial germ cell transplantation permits recovery of CRISPR/Cas9-induced mutations in essential genes Dynamics of Translation of Single mRNA Molecules In Vivo.CXCL6 is an important paracrine factor in the pro-angiogenic human cardiac progenitor-like cell secretome.Phosphorylation Dynamics Dominate the Regulated Proteome during Early Xenopus Development.A gapmer aptamer nanobiosensor for real-time monitoring of transcription and translation in single cells.Prc1E and Kif4A control microtubule organization within and between large xenopus egg asters.Proteomics of phosphorylation and protein dynamics during fertilization and meiotic exit in the Xenopus egg.Quantitative Proteomics After Spinal Cord Injury (SCI) in a Regenerative and a Nonregenerative Stage in the Frog Xenopus laevis.Metabolic Comparison of Dorsal versus Ventral Cells Directly in the Live 8-cell Frog Embryo by Microprobe Single-cell CE-ESI-MS.Gibbs free energy as a measure of complexity correlates with time within C. elegans embryonic development.ME31B globally represses maternal mRNAs by two distinct mechanisms during the Drosophila maternal-to-zygotic transition.HELLS and CDCA7 comprise a bipartite nucleosome remodeling complex defective in ICF syndrome.Primordial Germ Cell Transplantation for CRISPR/Cas9-based Leapfrogging in Xenopus.A NuRD Complex from Xenopus laevis Eggs Is Essential for DNA Replication during Early Embryogenesis.Pervasive, Coordinated Protein-Level Changes Driven by Transcript Isoform Switching during Meiosis.Condition-Specific Modeling of Biophysical Parameters Advances Inference of Regulatory Networks.Asymmetric distribution of biomolecules of maternal origin in the Xenopus laevis egg and their impact on the developmental plan.Expression variation and covariation impair analog and enable binary signaling control.The Xenopus animal cap transcriptome: building a mucociliary epithelium Methylation dynamics during the maternal-to-zygotic genome transition in dioecious species

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On the Relationship of Protein and mRNA Dynamics in Vertebrate Embryonic Development

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On the Relationship of Protein and mRNA Dynamics in Vertebrate Embryonic Development

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On the Relationship of Protein and mRNA Dynamics in Vertebrate Embryonic Development

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On the Relationship of Protein and mRNA Dynamics in Vertebrate Embryonic Development

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On the Relationship of Protein and mRNA Dynamics in Vertebrate Embryonic Development

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On the Relationship of Protein and mRNA Dynamics in Vertebrate Embryonic Development

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On the Relationship of Protein and mRNA Dynamics in Vertebrate Embryonic Development

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On the Relationship of Protein and mRNA Dynamics in Vertebrate Embryonic Development

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John C Gerhart

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Marc W Kirschner

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Robert M Freeman

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Diverse RNA-binding proteins interact with functionally related sets of RNAs, suggesting an extensive regulatory system

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

Regulation of cellular metabolism by protein lysine acetylation

Preservation of duplicate genes by complementary, degenerative mutations

Global quantification of mammalian gene expression control

Formation and detection of RNA-DNA hybrid molecules in cytological preparations

A method for the quantitative recovery of protein in dilute solution in the presence of detergents and lipids

RSEM: accurate transcript quantification from RNA-Seq data with or without a reference genome

ProteomeXchange provides globally coordinated proteomics data submission and dissemination

Xenbase: gene expression and improved integration

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