Combined in silico and experimental identification of the Pyrococcus abyssi H/ACA sRNAs and their target sites in ribosomal RNAs
about
Psiscan: a computational approach to identify H/ACA-like and AGA-like non-coding RNA in trypanosomatid genomes2'-O-methylation of the wobble residue of elongator pre-tRNA(Met) in Haloferax volcanii is guided by a box C/D RNA containing unique featuresStructural and functional evidence of high specificity of Cbf5 for ACA trinucleotideStructure of H/ACA RNP Protein Nhp2p Reveals Cis/Trans Isomerization of a Conserved Proline at the RNA and Nop10 Binding InterfaceComparative analysis of RNA families reveals distinct repertoires for each domain of lifeRNA at 92 °C: the non-coding transcriptome of the hyperthermophilic archaeon Pyrococcus abyssiStructure-function relationships of archaeal Cbf5 during in vivo RNA-guided pseudouridylation.Fisher: a program for the detection of H/ACA snoRNAs using MFE secondary structure prediction and comparative genomics - assessment and updateIdentification of CRISPR and riboswitch related RNAs among novel noncoding RNAs of the euryarchaeon Pyrococcus abyssi.Large-scale identification of small noncoding RNA with strand-specific deep sequencing and characterization of a novel virulence-related sRNA in Brucella melitensis.Archaeal Pus10 proteins can produce both pseudouridine 54 and 55 in tRNAComparative study of two box H/ACA ribonucleoprotein pseudouridine-synthases: relation between conformational dynamics of the guide RNA, enzyme assembly and activity.Pseudouridine formation in archaeal RNAs: The case of Haloferax volcanii.Parallel evolution of transcriptome architecture during genome reorganization.Contribution of two conserved histidines to the dual activity of archaeal RNA guide-dependent and -independent pseudouridine synthase Cbf5.Discovery of Pyrobaculum small RNA families with atypical pseudouridine guide RNA featuresRNomics and Modomics in the halophilic archaea Haloferax volcanii: identification of RNA modification genes.Deficiency of the tRNATyr:Psi 35-synthase aPus7 in Archaea of the Sulfolobales order might be rescued by the H/ACA sRNA-guided machineryRibonucleoproteins in archaeal pre-rRNA processing and modification.Small nucleolar RNAs and RNA-guided post-transcriptional modification.Archaeal fibrillarin-Nop5 heterodimer 2'-O-methylates RNA independently of the C/D guide RNP particle.Revisiting the structure/function relationships of H/ACA(-like) RNAs: a unified model for Euryarchaea and Crenarchaea.Evolution of small guide RNA genes in hyperthermophilic archaea.Role of forefinger and thumb loops in production of Ψ54 and Ψ55 in tRNAs by archaeal Pus10.Regulatory RNAs in Haloferax volcanii.Efficient RNA pseudouridylation by eukaryotic H/ACA ribonucleoproteins requires high affinity binding and correct positioning of guide RNA.Small RNAs of Haloferax mediterranei: Identification and Potential Involvement in Nitrogen Metabolism.Contribution of protein Gar1 to the RNA-guided and RNA-independent rRNA:Ψ-synthase activities of the archaeal Cbf5 protein
P2860
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P2860
Combined in silico and experimental identification of the Pyrococcus abyssi H/ACA sRNAs and their target sites in ribosomal RNAs
description
2008 nî lūn-bûn
@nan
2008年の論文
@ja
2008年論文
@yue
2008年論文
@zh-hant
2008年論文
@zh-hk
2008年論文
@zh-mo
2008年論文
@zh-tw
2008年论文
@wuu
2008年论文
@zh
2008年论文
@zh-cn
name
Combined in silico and experim ...... target sites in ribosomal RNAs
@ast
Combined in silico and experim ...... target sites in ribosomal RNAs
@en
type
label
Combined in silico and experim ...... target sites in ribosomal RNAs
@ast
Combined in silico and experim ...... target sites in ribosomal RNAs
@en
prefLabel
Combined in silico and experim ...... target sites in ribosomal RNAs
@ast
Combined in silico and experim ...... target sites in ribosomal RNAs
@en
P2093
P2860
P356
P1476
Combined in silico and experim ...... target sites in ribosomal RNAs
@en
P2093
Bruno Charpentier
Christiane Branlant
Jean-Baptiste Fourmann
Sébastien Muller
P2860
P304
P356
10.1093/NAR/GKN077
P407
P577
2008-02-27T00:00:00Z