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A probabilistic model of RNA conformational spaceDotKnot: pseudoknot prediction using the probability dot plot under a refined energy modelFrnakenstein: multiple target inverse RNA foldingThe 3' proximal translational enhancer of Turnip crinkle virus binds to 60S ribosomal subunitsCoarse-grained modeling of large RNA molecules with knowledge-based potentials and structural filtersiFoldRNA: three-dimensional RNA structure prediction and foldingAutomated de novo prediction of native-like RNA tertiary structuresRNA conformational changes in the life cycles of RNA viruses, viroids, and virus-associated RNAsPredicting consensus structures for RNA alignments via pseudo-energy minimizationInterplay among side chain sequence, backbone composition, and residue rigidification in polypeptide folding and assemblyDiversity and three-dimensional structures of the alpha Mcr of the methanogenic Archaea from the anoxic region of Tucuruí Lake, in Eastern Brazilian AmazoniaFully differentiable coarse-grained and all-atom knowledge-based potentials for RNA structure evaluation.Modeling the structure of RNA molecules with small-angle X-ray scattering data.Characterizing RNA ensembles from NMR data with kinematic models.Improving the prediction of mRNA extremities in the parasitic protozoan LeishmaniaPrediction of RNA multiloop and pseudoknot conformations from a lattice-based, coarse-grain tertiary structure model.Predicting loop-helix tertiary structural contacts in RNA pseudoknots.Atomic accuracy in predicting and designing noncanonical RNA structure.In silico design and enzymatic synthesis of functional RNA nanoparticles.On the significance of an RNA tertiary structure prediction.RAG: an update to the RNA-As-Graphs resourceAdvances in RNA structure analysis by chemical probing.Computational modeling of RNA 3D structures, with the aid of experimental restraints.SHAPE-directed RNA secondary structure prediction.Discrete RNA libraries from pseudo-torsional spaceA two-dimensional mutate-and-map strategy for non-coding RNA structure.Simultaneous prediction of RNA secondary structure and helix coaxial stacking.MASTR: multiple alignment and structure prediction of non-coding RNAs using simulated annealing.RNA2D3D: a program for generating, viewing, and comparing 3-dimensional models of RNAVfold: a web server for RNA structure and folding thermodynamics prediction.Structure and stability of RNA/RNA kissing complex: with application to HIV dimerization initiation signalA Method to Predict the 3D Structure of an RNA ScaffoldNew insights into the fundamental role of topological constraints as a determinant of two-way junction conformationGARN: Sampling RNA 3D Structure Space with Game Theory and Knowledge-Based Scoring StrategiesStatistical evaluation of improvement in RNA secondary structure prediction.The zinc fingers of YY1 bind single-stranded RNA with low sequence specificity.An Adaptive Defect Weighted Sampling Algorithm to Design Pseudoknotted RNA Secondary StructuresUniqueness, advantages, challenges, solutions, and perspectives in therapeutics applying RNA nanotechnology.Automated and fast building of three-dimensional RNA structures.GARN2: coarse-grained prediction of 3D structure of large RNA molecules by regret minimization.
P2860
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P2860
description
2007 nî lūn-bûn
@nan
2007年の論文
@ja
2007年論文
@yue
2007年論文
@zh-hant
2007年論文
@zh-hk
2007年論文
@zh-mo
2007年論文
@zh-tw
2007年论文
@wuu
2007年论文
@zh
2007年论文
@zh-cn
name
Bridging the gap in RNA structure prediction.
@ast
Bridging the gap in RNA structure prediction.
@en
type
label
Bridging the gap in RNA structure prediction.
@ast
Bridging the gap in RNA structure prediction.
@en
prefLabel
Bridging the gap in RNA structure prediction.
@ast
Bridging the gap in RNA structure prediction.
@en
P2093
P1476
Bridging the gap in RNA structure prediction
@en
P2093
Bruce A Shapiro
Eckart Bindewald
Wojciech Kasprzak
P304
P356
10.1016/J.SBI.2007.03.001
P577
2007-03-23T00:00:00Z