Two strategies for gene regulation by promoter nucleosomes
about
Protein stickiness, rather than number of functional protein-protein interactions, predicts expression noise and plasticity in yeastEukaryotic genomes may exhibit up to 10 generic classes of gene promotersYPA: an integrated repository of promoter features in Saccharomyces cerevisiaeGenetic determinants and cellular constraints in noisy gene expressionTranscription goes digitalMechanics of the IL2RA gene activation revealed by modeling and atomic force microscopyDNA Methylation within Transcribed RegionsEvolution of 5' untranslated region length and gene expression reprogramming in yeastsHIV promoter integration site primarily modulates transcriptional burst size rather than frequencyChromatin computationLineage-specific conserved noncoding sequences of plant genomes: their possible role in nucleosome positioningDistinct modes of regulation by chromatin encoded through nucleosome positioning signalsTwo distinct modes of nucleosome modulation associated with different degrees of dependence of nucleosome positioning on the underlying DNA sequence.Robustness of transcriptional regulatory program influences gene expression variability.Insights into distinct regulatory modes of nucleosome positioning.New insights into two distinct nucleosome distributions: comparison of cross-platform positioning datasets in the yeast genome.High-resolution nucleosome mapping reveals transcription-dependent promoter packaging.Nucleosome positioning by genomic excluding-energy barriers.Identification and characterization of putative methylation targets in the MAOA locus using bioinformatic approachesNatural single-nucleosome epi-polymorphisms in yeast.Genome-wide views of chromatin structureFungal regulatory evolution: cis and trans in the balance.Prediction of nucleosome positioning based on transcription factor binding sitesNucleosome positioning: how is it established, and why does it matter?The spatial distribution of cis regulatory elements in yeast promoters and its implications for transcriptional regulation.Patterns of human gene expression variance show strong associations with signaling network hierarchy.Conflict between noise and plasticity in yeast.An ensemble of B-DNA dinucleotide geometries lead to characteristic nucleosomal DNA structure and provide plasticity required for gene expression.Epigenetic regulation of learning and memory by Drosophila EHMT/G9a.Transcription initiation patterns indicate divergent strategies for gene regulation at the chromatin levelPreparation of fully synthetic histone H3 reveals that acetyl-lysine 56 facilitates protein binding within nucleosomes.Nucleosome-depleted regions in cell-cycle-regulated promoters ensure reliable gene expression in every cell cycle.Chromatin organization in sperm may be the major functional consequence of base composition variation in the human genomeGenome-wide landscape of position effects on heterogeneous gene expression in Saccharomyces cerevisiae.Evidence of association between nucleosome occupancy and the evolution of transcription factor binding sites in yeast.Integrated genome-scale prediction of detrimental mutations in transcription networks.The role of nucleosome positioning in the evolution of gene regulation.Coupled evolution of transcription and mRNA degradation.Two distinct promoter architectures centered on dynamic nucleosomes control ribosomal protein gene transcriptionTight associations between transcription promoter type and epigenetic variation in histone positioning and modification.
P2860
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P2860
Two strategies for gene regulation by promoter nucleosomes
description
2008 nî lūn-bûn
@nan
2008年の論文
@ja
2008年論文
@yue
2008年論文
@zh-hant
2008年論文
@zh-hk
2008年論文
@zh-mo
2008年論文
@zh-tw
2008年论文
@wuu
2008年论文
@zh
2008年论文
@zh-cn
name
Two strategies for gene regulation by promoter nucleosomes
@ast
Two strategies for gene regulation by promoter nucleosomes
@en
type
label
Two strategies for gene regulation by promoter nucleosomes
@ast
Two strategies for gene regulation by promoter nucleosomes
@en
prefLabel
Two strategies for gene regulation by promoter nucleosomes
@ast
Two strategies for gene regulation by promoter nucleosomes
@en
P2860
P356
P1433
P1476
Two strategies for gene regulation by promoter nucleosomes
@en
P2093
Itay Tirosh
Naama Barkai
P2860
P304
P356
10.1101/GR.076059.108
P50
P577
2008-04-30T00:00:00Z