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Automated glycopeptide analysis--review of current state and future directions

Automated glycopeptide analysis--review of current state and future directions

http://www.wikidata.org/entity/Q36860100

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High-Throughput Analysis and Automation for Glycomics Studies Exploring site-specific N-glycosylation microheterogeneity of haptoglobin using glycopeptide CID tandem mass spectra and glycan database search A review of methods for interpretation of glycopeptide tandem mass spectral data.Peptidomic profile of milk of Holstein cows at peak lactation.Comprehensive peptidomic and glycomic evaluation reveals that sweet whey permeate from colostrum is a source of milk protein-derived peptides and oligosaccharides.Confident assignment of site-specific glycosylation in complex glycoproteins in a single step Oligosaccharide analysis by mass spectrometry: a review of recent developments Current peptidomics: applications, purification, identification, quantification, and functional analysis Evaluation of a combined glycomics and glycoproteomics approach for studying the major glycoproteins present in biofluids: Application to cerebrospinal fluid.Glycopeptide Site Heterogeneity and Structural Diversity Determined by Combined Lectin Affinity Chromatography/IMS/CID/MS Techniques.The Art of Destruction: Optimizing Collision Energies in Quadrupole-Time of Flight (Q-TOF) Instruments for Glycopeptide-Based Glycoproteomics.Characterization of protein N-glycosylation by tandem mass spectrometry using complementary fragmentation techniques Site-specific O-Glycosylation Analysis of Human Blood Plasma Proteins pGlyco: a pipeline for the identification of intact N-glycopeptides by using HCD- and CID-MS/MS and MS3.SweetSEQer, simple de novo filtering and annotation of glycoconjugate mass spectra.Automated assignments of N- and O-site specific glycosylation with extensive glycan heterogeneity of glycoprotein mixtures.Integrated Omics and Computational Glycobiology Reveal Structural Basis for Influenza A Virus Glycan Microheterogeneity and Host Interactions.Glycocapture-based proteomics for secretome analysis.Engaging challenges in glycoproteomics: recent advances in MS-based glycopeptide analysis.Algorithms and design strategies towards automated glycoproteomics analysis.Liquid chromatography-tandem mass spectrometry-based fragmentation analysis of glycopeptides.Chemical Glycoproteomics.Quantitative glycomics using liquid phase separations coupled to mass spectrometry.Use of an informed search space maximizes confidence of site-specific assignment of glycoprotein glycosylation.Glycosylation profiling to evaluate glycoprotein immunogens against HIV-1.pGlyco 2.0 enables precision N-glycoproteomics with comprehensive quality control and one-step mass spectrometry for intact glycopeptide identification A Comprehensive, Open-source Platform for Mass Spectrometry-based Glycoproteomics Data Analysis.Designation of fingerprint glycopeptides for targeted glycoproteomic analysis of serum haptoglobin: insights into gastric cancer biomarker discovery.PepSweetener: A Web-Based Tool to Support Manual Annotation of Intact Glycopeptide MS Spectra.Large-scale intact glycopeptide identification by Mascot database search.Identification of Poly-N-Acetyllactosamine-Carrying Glycoproteins from HL-60 Human Promyelocytic Leukemia Cells Using a Site-Specific Glycome Analysis Method, Glyco-RIDGE.

P2860

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P2860

Automated glycopeptide analysis--review of current state and future directions

http://www.wikidata.org/entity/Q36860100

description

2012 nî lūn-bûn

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2012年の論文

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2012年論文

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2012年論文

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2012年論文

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2012年論文

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2012年論文

@zh-tw

2012年论文

@wuu

2012年论文

@zh

2012年论文

@zh-cn

name

Automated glycopeptide analysis--review of current state and future directions

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type

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Automated glycopeptide analysis--review of current state and future directions

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Automated glycopeptide analysis--review of current state and future directions

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P1433

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Briefings in Bioinformatics

P1476

Automated glycopeptide analysis--review of current state and future directions

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P2093

David C Dallas

http://www.w3.org/2001/XMLSchema#string

J Bruce German

http://www.w3.org/2001/XMLSchema#string

Serenus Hua

http://www.w3.org/2001/XMLSchema#string

William F Martin

http://www.w3.org/2001/XMLSchema#string

P2860

Probability-based protein identification by searching sequence databases using mass spectrometry data

An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

The glycan moiety of human pancreatic lithostathine. Structure characterization and possible pathophysiological implications

On the frequency of protein glycosylation, as deduced from analysis of the SWISS-PROT database

TANDEM: matching proteins with tandem mass spectra

"Glyco-peakfinder"--de novo composition analysis of glycoconjugates.

GlycoMod--a software tool for determining glycosylation compositions from mass spectrometric data.

Development of a mass fingerprinting tool for automated interpretation of oligosaccharide fragmentation data.

Detailed glycan analysis of serum glycoproteins of patients with congenital disorders of glycosylation indicates the specific defective glycan processing step and provides an insight into pathogenesis.

GlycoSpectrumScan: fishing glycopeptides from MS spectra of protease digests of human colostrum sIgA.

P304

361-374

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scholarly article

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10.1093/BIB/BBS045

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3

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14

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2012-07-27T00:00:00Z

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22843980

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3659302

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