Molecular dynamics simulations of the unfolding of barnase in water and 8 M aqueous urea.
about
Recent applications of Kirkwood-Buff theory to biological systemsA consensus view of protein dynamicsExploring early stages of the chemical unfolding of proteins at the proteome scaleWater and urea interactions with the native and unfolded forms of a beta-barrel protein.Computational studies on mutant protein stability: The correlation between surface thermal expansion and protein stability.Unfolding of apomyoglobin helices by synchrotron radiolysis and mass spectrometry.Exploratory studies of ab initio protein structure prediction: multiple copy simulated annealing, AMBER energy functions, and a generalized born/solvent accessibility solvation model.Urea, but not guanidinium, destabilizes proteins by forming hydrogen bonds to the peptide group.Interaction-component analysis of the hydration and urea effects on cytochrome c.An analysis of the influence of protein intrinsic dynamical properties on its thermal unfolding behavior.Toward an atomistic description of the urea-denatured state of proteins.Protein unfolding transitions in an intrinsically unstable annexin domain: molecular dynamics simulation and comparison with nuclear magnetic resonance dataCharacterization of the protein unfolding processes induced by urea and temperatureFolding-unfolding of goat alpha-lactalbumin studied by stopped-flow circular dichroism and molecular dynamics simulations.Unfolding of titin immunoglobulin domains by steered molecular dynamics simulationCharacterization of residual structure in the thermally denatured state of barnase by simulation and experiment: description of the folding pathwayThe hydrogen exchange core and protein folding.Backbone additivity in the transfer model of protein solvation.Molecular dynamics simulations of unfolding and refolding of a beta-hairpin fragment of protein GAssessing accumulated solvent near a macromolecular solute by preferential interaction coefficientsEffect of urea on peptide conformation in water: molecular dynamics and experimental characterization.On the simulation of protein folding by short time scale molecular dynamics and distributed computing.Defining the nature of thermal intermediate in 3 state folding proteins: apoflavodoxin, a study case.The molecular basis for the chemical denaturation of proteins by urea.The interaction of guanidinium ions with a model peptide.Anatomy of energetic changes accompanying urea-induced protein denaturation.Synergy between simulation and experiment in describing the energy landscape of protein folding.Urea-Water Solvation Forces on Prion StructuresUrea orientation at protein surfaces.Urea denaturation by stronger dispersion interactions with proteins than water implies a 2-stage unfolding.Dewetting and hydrophobic interaction in physical and biological systems.Microsecond molecular dynamics simulation of guanidinium chloride induced unfolding of ubiquitin.Protein unfolding behavior studied by elastic network modelProbing the Action of Chemical Denaturant on an Intrinsically Disordered Protein by Simulation and Experiment.Molecular dynamics simulations of hydrophobic collapse of ubiquitin.Glucose oxidase from Penicillium amagasakiense: characterization of the transition state of its denaturation from molecular dynamics simulations.Classical molecular interaction potentials: improved setup procedure in molecular dynamics simulations of proteins.Interaction-component analysis of the urea effect on amino acid analogs.Comparison of chemical and thermal protein denaturation by combination of computational and experimental approaches. II.Interaction-component analysis of the effects of urea and its alkylated derivatives on the structure of T4-lysozyme.
P2860
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P2860
Molecular dynamics simulations of the unfolding of barnase in water and 8 M aqueous urea.
description
1997 nî lūn-bûn
@nan
1997年の論文
@ja
1997年論文
@yue
1997年論文
@zh-hant
1997年論文
@zh-hk
1997年論文
@zh-mo
1997年論文
@zh-tw
1997年论文
@wuu
1997年论文
@zh
1997年论文
@zh-cn
name
Molecular dynamics simulations of the unfolding of barnase in water and 8 M aqueous urea.
@en
type
label
Molecular dynamics simulations of the unfolding of barnase in water and 8 M aqueous urea.
@en
prefLabel
Molecular dynamics simulations of the unfolding of barnase in water and 8 M aqueous urea.
@en
P2093
P356
P1433
P1476
Molecular dynamics simulations of the unfolding of barnase in water and 8 M aqueous urea.
@en
P2093
Jorgensen WL
Tirado-Rives J
P304
P356
10.1021/BI970096I
P407
P577
1997-06-01T00:00:00Z