Metal ion specificities for folding and cleavage activity in the Schistosoma hammerhead ribozyme
about
Cation-dependent cleavage of the duplex form of the subtype-B HIV-1 RNA dimerization initiation siteThe hammerhead ribozyme: structure, catalysis, and gene regulationCa2+ induces the formation of two distinct subpopulations of group II intron molecules.Enhanced product stability in the hammerhead ribozyme.Precise mapping of RNA tertiary structure via nanometer distance measurements with double electron-electron resonance spectroscopyMetal ions: supporting actors in the playbook of small ribozymes.Analysis of metal ion dependence in glmS ribozyme self-cleavage and coenzyme bindingGround-state coordination of a catalytic metal to the scissile phosphate of a tertiary-stabilized Hammerhead ribozyme.Folding of the hammerhead ribozyme: pyrrolo-cytosine fluorescence separates core folding from global folding and reveals a pH-dependent conformational change.Metal-ion-dependent folding of a uranyl-specific DNAzyme: insight into function from fluorescence resonance energy transfer studies.Two Divalent Metal Ions and Conformational Changes Play Roles in the Hammerhead Ribozyme Cleavage Reaction.Bridging the gap between theory and experiment to derive a detailed understanding of hammerhead ribozyme catalysis.Two Active Site Divalent Ions in the Crystal Structure of the Hammerhead Ribozyme Bound to a Transition State AnalogueIntermolecular domain docking in the hairpin ribozyme: metal dependence, binding kinetics and catalysisActivity, folding and Z-DNA formation of the 8-17 DNAzyme in the presence of monovalent ions.Model systems: how chemical biologists study RNA.Finding aptamers and small ribozymes in unexpected places.Two distinct catalytic strategies in the hepatitis δ virus ribozyme cleavage reaction.Nucleic acid catalysis: metals, nucleobases, and other cofactors.Divalent Metal Ion Activation of a Guanine General Base in the Hammerhead Ribozyme: Insights from Molecular Simulations.The structure of a nucleolytic ribozyme that employs a catalytic metal ion.Site-specific platinum(II) cross-linking in a ribozyme active site.Long-range tertiary interactions in single hammerhead ribozymes bias motional sampling toward catalytically active conformationsThe identity of the nucleophile substitution may influence metal interactions with the cleavage site of the minimal hammerhead ribozyme.Rapid steps in the glmS ribozyme catalytic pathway: cation and ligand requirements.Prediction of hammerhead ribozyme intracellular activity with the catalytic core fingerprint.Multi-metal-dependent nucleic acid enzymes.An implicit divalent counterion force field for RNA molecular dynamics.Free energy of RNA-counterion interactions in a tight-binding model computed by a discrete space mapping.Liposome membrane can induce self-cleavage of RNA that models the core fragments of hammerhead ribozyme.Enzymatic synthesis of cyclic dinucleotide analogs by a promiscuous cyclic-AMP-GMP synthetase and analysis of cyclic dinucleotide responsive riboswitches.Effects of background anionic compounds on the activity of the hammerhead ribozyme in Mg(2+)-unsaturated solutions.Effects of Cosolvents on the Folding and Catalytic Activities of the Hammerhead Ribozyme.Higher-order human telomeric G-quadruplex DNA metalloenzyme catalyzed Diels-Alder reaction: an unexpected inversion of enantioselectivity modulated by K(+) and NH4(+) ions.
P2860
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P2860
Metal ion specificities for folding and cleavage activity in the Schistosoma hammerhead ribozyme
description
2008 nî lūn-bûn
@nan
2008年の論文
@ja
2008年論文
@yue
2008年論文
@zh-hant
2008年論文
@zh-hk
2008年論文
@zh-mo
2008年論文
@zh-tw
2008年论文
@wuu
2008年论文
@zh
2008年论文
@zh-cn
name
Metal ion specificities for fo ...... chistosoma hammerhead ribozyme
@en
type
label
Metal ion specificities for fo ...... chistosoma hammerhead ribozyme
@en
prefLabel
Metal ion specificities for fo ...... chistosoma hammerhead ribozyme
@en
P2093
P2860
P356
P1433
P1476
Metal ion specificities for fo ...... chistosoma hammerhead ribozyme
@en
P2093
Arthur Pardi
Ehsan Azimi
Jennifer L Boots
Marella D Canny
P2860
P304
P356
10.1261/RNA.1010808
P407
P577
2008-08-28T00:00:00Z