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Cell type-specific gene expression differences in complex tissues

Cell type-specific gene expression differences in complex tissues

http://www.wikidata.org/entity/Q36975911

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Systems immunology of human malaria Development of a blood-based gene expression algorithm for assessment of obstructive coronary artery disease in non-diabetic patients Lessons learned in the analysis of high-dimensional data in vaccinomics Novel technologies and emerging biomarkers for personalized cancer immunotherapy Blood transcriptomics and metabolomics for personalized medicine Utilizing population variation, vaccination, and systems biology to study human immunology Perspectives on systems biology applications in diabetic kidney disease Epigenomics of idiopathic pulmonary fibrosis Profiling immunity to HIV vaccines with systems biology Genetic analysis of the cardiac methylome at single nucleotide resolution in a model of human cardiovascular disease Current perspectives on systems immunology approaches to rheumatic diseases.High resolution methylome map of rat indicates role of intragenic DNA methylation in identification of coding region Chronic psychosocial stressors and salivary biomarkers in emerging adults Optimal deconvolution of transcriptional profiling data using quadratic programming with application to complex clinical blood samples Investigation of variation in gene expression profiling of human blood by extended principle component analysis Analysis of the transcriptome in molecular epidemiology studies Parameterizing cell-to-cell regulatory heterogeneities via stochastic transcriptional profiles.DNA methylation arrays as surrogate measures of cell mixture distribution.CTen: a web-based platform for identifying enriched cell types from heterogeneous microarray data.Computational solutions for omics data.DeMix: deconvolution for mixed cancer transcriptomes using raw measured data.Inferring tumour purity and stromal and immune cell admixture from expression data An assessment of computational methods for estimating purity and clonality using genomic data derived from heterogeneous tumor tissue samples Cell Type Specific Analysis of Human Brain Transcriptome Data to Predict Alterations in Cellular Composition.Discovering What Dimensionality Reduction Really Tells Us About RNA-Seq Data.B-Cell and Monocyte Contribution to Systemic Lupus Erythematosus Identified by Cell-Type-Specific Differential Expression Analysis in RNA-Seq Data.contamDE: differential expression analysis of RNA-seq data for contaminated tumor samples.Topic model-based mass spectrometric data analysis in cancer biomarker discovery studies Complex Sources of Variation in Tissue Expression Data: Analysis of the GTEx Lung Transcriptome A self-directed method for cell-type identification and separation of gene expression microarrays.Integration of Immune Cell Populations, mRNA-Seq, and CpG Methylation to Better Predict Humoral Immunity to Influenza Vaccination: Dependence of mRNA-Seq/CpG Methylation on Immune Cell Populations Assessing the human immune system through blood transcriptomics.Biomarkers of safety and immune protection for genetically modified live attenuated leishmania vaccines against visceral leishmaniasis - discovery and implications.Inflammatory and myeloid-associated gene expression before and one day after infant vaccination with MVA85A correlates with induction of a T cell response Single-tissue and cross-tissue heritability of gene expression via identity-by-descent in related or unrelated individuals.Biomarkers in renal transplantation: An updated review.Lessons from miR-143/145: the importance of cell-type localization of miRNAs Comparison of automated and human assignment of MeSH terms on publicly-available molecular datasets Systems-level analysis of innate immunity.The Biological Connection Markup Language: a SBGN-compliant format for visualization, filtering and analysis of biological pathways.

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Cell type-specific gene expression differences in complex tissues

http://www.wikidata.org/entity/Q36975911

description

2010 nî lūn-bûn

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2010年の論文

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2010年論文

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2010年論文

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2010年論文

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2010年論文

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2010年論文

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2010年论文

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2010年论文

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2010年论文

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name

Cell type-specific gene expression differences in complex tissues

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type

label

Cell type-specific gene expression differences in complex tissues

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prefLabel

Cell type-specific gene expression differences in complex tissues

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Cell type-specific gene expression differences in complex tissues

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P2093

Dale L Bodian

http://www.w3.org/2001/XMLSchema#string

Frank Staedtler

http://www.w3.org/2001/XMLSchema#string

Mark M Davis

http://www.w3.org/2001/XMLSchema#string

Minnie M Sarwal

http://www.w3.org/2001/XMLSchema#string

Nicholas M Perry

http://www.w3.org/2001/XMLSchema#string

Purvesh Khatri

http://www.w3.org/2001/XMLSchema#string

Shai S Shen-Orr

http://www.w3.org/2001/XMLSchema#string

P2860

Significance analysis of microarrays applied to the ionizing radiation response

In silico microdissection of microarray data from heterogeneous cell populations

Expression deconvolution: a reinterpretation of DNA microarray data reveals dynamic changes in cell populations

Cell-type specific gene expression profiles of leukocytes in human peripheral blood.

Computational expression deconvolution in a complex mammalian organ

Deconvolution of blood microarray data identifies cellular activation patterns in systemic lupus erythematosus

Application of genome-wide expression analysis to human health and disease.

Individuality and variation in gene expression patterns in human blood

In silico dissection of cell-type-associated patterns of gene expression in prostate cancer

Comparison of different isolation techniques prior gene expression profiling of blood derived cells: impact on physiological responses, on overall expression and the role of different cell types.

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287-289

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10.1038/NMETH.1439

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4

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7

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Robert Tibshirani

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2010-03-07T00:00:00Z

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20208531

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3699332

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