Factors that contribute to the misidentification of tyrosine nitration by shotgun proteomics.
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Nanoscale Extracellular Vesicle Analysis in Alzheimer's Disease Diagnosis and TherapyLessons in de novo peptide sequencing by tandem mass spectrometryMass spectrometry-based methods for identifying oxidized proteins in disease: advances and challengesProteins from Avastin® (bevacizumab) show tyrosine nitrations for which the consequences are completely unclearEffects of age and calorie restriction on tryptophan nitration, protein content, and activity of succinyl-CoA:3-ketoacid CoA transferase in rat kidney mitochondriaWhen is mass spectrometry combined with affinity approaches essential? A case study of tyrosine nitration in proteins.Evaluation of a method for nitrotyrosine site identification and relative quantitation using a stable isotope-labeled nitrated spike-in standard and high resolution fourier transform MS and MS/MS analysisIn vitro and in vivo protein-bound tyrosine nitration characterized by diagonal chromatographyIn vivo protein tyrosine nitration in Arabidopsis thalianaConfident identification of 3-nitrotyrosine modifications in mass spectral data across multiple mass spectrometry platformsEndogenous 3,4-dihydroxyphenylalanine and dopaquinone modifications on protein tyrosine: links to mitochondrially derived oxidative stress via hydroxyl radicalROCS: a reproducibility index and confidence score for interaction proteomics studies.Selective chemoprecipitation and subsequent release of tagged species for the analysis of nitropeptides by liquid chromatography-tandem mass spectrometryTo tag or not to tag: a comparative evaluation of immunoaffinity-labeling and tandem mass spectrometry for the identification and localization of posttranslational protein carbonylation by 4-hydroxy-2-nonenal, an end-product of lipid peroxidation.Mass spectrometric identification of novel lysine acetylation sites in huntingtinSelective chemoprecipitation to enrich nitropeptides from complex proteomes for mass-spectrometric analysisRelative quantitation of protein nitration by liquid chromatography-mass spectrometry using isotope-coded dimethyl labeling and chemoprecipitation.ANSID: A Solid-Phase Proteomic Approach for Identification and Relative Quantification of Aromatic Nitration SitesPreferentially increased nitration of alpha-synuclein at tyrosine-39 in a cellular oxidative model of Parkinson's disease.Alpha-synuclein post-translational modifications as potential biomarkers for Parkinson disease and other synucleinopathies.Analytical methods for 3-nitrotyrosine quantification in biological samples: the unique role of tandem mass spectrometry.Mass spectrometry and 3-nitrotyrosine: strategies, controversies, and our current perspective.Understanding and applying tyrosine biochemical diversity.The application of targeted mass spectrometry-based strategies to the detection and localization of post-translational modifications.Mass spectrometric analysis of protein tyrosine nitration in aging and neurodegenerative diseases.Exploring oxidative modifications of tyrosine: an update on mechanisms of formation, advances in analysis and biological consequences.Systematic Errors in Peptide and Protein Identification and Quantification by Modified Peptides.Misidentification of nitrated peptides: comments on Hong, S.J., Gokulrangan, G., Schöneich, C., 2007. Proteomic analysis of age-dependent nitration of rat cardiac proteins by solution isoelectric focusing coupled to nanoHPLC tandem mass spectrometryIdentification of tyrosine nitration in UCH-L1 and GAPDH.Conversion of 3-nitrotyrosine to 3-aminotyrosine residues facilitates mapping of tyrosine nitration in proteins by electrospray ionization-tandem mass spectrometry using electron capture dissociation.A stringent approach to improve the quality of nitrotyrosine peptide identifications.A novel targeted proteomics method for identification and relative quantitation of difference in nitration degree of OGDH between healthy and diabetic mouse.
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Factors that contribute to the misidentification of tyrosine nitration by shotgun proteomics.
description
article científic
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article scientifique
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articolo scientifico
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artigo científico
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bilimsel makale
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scientific article published on 16 August 2008
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vedecký článok
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vetenskaplig artikel
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videnskabelig artikel
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vědecký článek
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name
Factors that contribute to the ...... tration by shotgun proteomics.
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Factors that contribute to the ...... tration by shotgun proteomics.
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Factors that contribute to the ...... tration by shotgun proteomics.
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Factors that contribute to the ...... tration by shotgun proteomics.
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Factors that contribute to the ...... tration by shotgun proteomics.
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Factors that contribute to the ...... tration by shotgun proteomics.
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P2860
P1476
Factors that contribute to the ...... itration by shotgun proteomics
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P2093
Katalin Prokai-Tatrai
Stanley M Stevens
P2860
P304
P356
10.1074/MCP.M800065-MCP200
P577
2008-08-16T00:00:00Z