Influence of crowded cellular environments on protein folding, binding, and oligomerization: biological consequences and potentials of atomistic modeling.
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The Effects of Lipid Membranes, Crowding and Osmolytes on the Aggregation, and Fibrillation Propensity of Human IAPPComparing protein folding in vitro and in vivo: foldability meets the fitness challengeMacromolecular interactions of the bacterial division FtsZ protein: from quantitative biochemistry and crowding to reconstructing minimal divisomes in the test tubeThe Effects of Macromolecular Crowding on Calmodulin Structure and Function.New insights into bacterial chemoreceptor array structure and assembly from electron cryotomography.Protein-protein interactions in dilute to concentrated solutions: α-chymotrypsinogen in acidic conditions.Further Development of the FFT-based Method for Atomistic Modeling of Protein Folding and Binding under Crowding: Optimization of Accuracy and Speed.Coarse-grained model for colloidal protein interactions, B(22), and protein cluster formation.Residue level quantification of protein stability in living cells.Interactions of macromolecular crowding agents and cosolutes with small-molecule substrates: effect on horseradish peroxidase activity with two different substrates.The effect of macromolecular crowding on the electrostatic component of barnase-barstar binding: a computational, implicit solvent-based study.Competitive interactions of ligands and macromolecular crowders with maltose binding protein.An FFT-based method for modeling protein folding and binding under crowding: benchmarking on ellipsoidal and all-atom crowdersImpact of reconstituted cytosol on protein stability.Effects of Macromolecular Crowding on the Conformational Ensembles of Disordered Proteins.Minimal effects of macromolecular crowding on an intrinsically disordered protein: a small-angle neutron scattering study.Structure of bacterial cytoplasmic chemoreceptor arrays and implications for chemotactic signaling.Coupled enzyme reactions performed in heterogeneous reaction media: experiments and modeling for glucose oxidase and horseradish peroxidase in a PEG/citrate aqueous two-phase system.Reaching new levels of realism in modeling biological macromolecules in cellular environments.Foundations for modeling the dynamics of gene regulatory networks: a multilevel-perspective review.Mechanistic studies of the biogenesis and folding of outer membrane proteins in vitro and in vivo: what have we learned to date?Methods of measuring protein disulfide isomerase activity: a critical overview.Redesigning the procaspase-8 dimer interface for improved dimerization.Challenges in structural approaches to cell modeling.Cell-wide analysis of protein thermal unfolding reveals determinants of thermostability.Protein folding, binding, and droplet formation in cell-like conditions.Molecular dynamics simulations and CD spectroscopy reveal hydration-induced unfolding of the intrinsically disordered LEA proteins COR15A and COR15B from Arabidopsis thaliana.The α10 helix of DevR, the Mycobacterium tuberculosis dormancy response regulator, regulates its DNA binding and activity.Hydrogen exchange of disordered proteins in Escherichia coli.Large-scale analysis of macromolecular crowding effects on protein aggregation using a reconstituted cell-free translation system.Spectroscopic Characterization of Structural Changes in Membrane Scaffold Proteins Entrapped within Mesoporous Silica Gel Monoliths.Crowding in Cellular Environments at an Atomistic Level from Computer Simulations.Implications of macromolecular crowding and reducing conditions for in vitro ribosome construction.Making microenvironments: A look into incorporating macromolecular crowding into in vitro experiments, to generate biomimetic microenvironments which are capable of directing cell function for tissue engineering applications.Quantification of excluded volume effects on the folding landscape of Pseudomonas aeruginosa apoazurin in vitro.The many faces of proteins.A new scaling for the rotational diffusion of molecular probes in polymer solutions.Crowders and Cosolvents-Major Contributors to the Cellular Milieu and Efficient Means to Counteract Environmental Stresses.Identification of primary and secondary UBA footprints on the surface of ubiquitin in cell-mimicking crowded solution.How are molecular crowding and the spatial organization of a biopolymer interrelated.
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P2860
Influence of crowded cellular environments on protein folding, binding, and oligomerization: biological consequences and potentials of atomistic modeling.
description
article científic
@ca
article scientifique
@fr
articolo scientifico
@it
artigo científico
@pt
bilimsel makale
@tr
scientific article published on 05 February 2013
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vedecký článok
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vetenskaplig artikel
@sv
videnskabelig artikel
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vědecký článek
@cs
name
Influence of crowded cellular ...... entials of atomistic modeling.
@en
Influence of crowded cellular ...... entials of atomistic modeling.
@nl
type
label
Influence of crowded cellular ...... entials of atomistic modeling.
@en
Influence of crowded cellular ...... entials of atomistic modeling.
@nl
prefLabel
Influence of crowded cellular ...... entials of atomistic modeling.
@en
Influence of crowded cellular ...... entials of atomistic modeling.
@nl
P2860
P1433
P1476
Influence of crowded cellular ...... entials of atomistic modeling.
@en
P2093
Huan-Xiang Zhou
P2860
P304
P356
10.1016/J.FEBSLET.2013.01.064
P407
P577
2013-02-05T00:00:00Z