Linking high-resolution metabolic flux phenotypes and transcriptional regulation in yeast modulated by the global regulator Gcn4p. - Wikidata - wikimedia - TriplyDB

Linking high-resolution metabolic flux phenotypes and transcriptional regulation in yeast modulated by the global regulator Gcn4p.

Linking high-resolution metabolic flux phenotypes and transcriptional regulation in yeast modulated by the global regulator Gcn4p.

http://www.wikidata.org/entity/Q37167828

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Physiologically Shrinking the Solution Space of a Saccharomyces cerevisiae Genome-Scale Model Suggests the Role of the Metabolic Network in Shaping Gene Expression Noise Parts plus pipes: synthetic biology approaches to metabolic engineering Sampling the solution space in genome-scale metabolic networks reveals transcriptional regulation in key enzymes Shrinking the metabolic solution space using experimental datasets Modeling phenotypic metabolic adaptations of Mycobacterium tuberculosis H37Rv under hypoxia Systematic evaluation of methods for integration of transcriptomic data into constraint-based models of metabolism Computational analysis of reciprocal association of metabolism and epigenetics in the budding yeast: a genome-scale metabolic model (GSMM) approach Biofilm Formation Mechanisms of Pseudomonas aeruginosa Predicted via Genome-Scale Kinetic Models of Bacterial Metabolism Integration of expression data in genome-scale metabolic network reconstructions.Metabolic network analysis of Pseudomonas aeruginosa during chronic cystic fibrosis lung infection Functional integration of a metabolic network model and expression data without arbitrary thresholding.Mapping global effects of the anti-sigma factor MucA in Pseudomonas fluorescens SBW25 through genome-scale metabolic modeling Integration of transcription and flux data reveals molecular paths associated with differences in oxygen-dependent phenotypes of Saccharomyces cerevisiae.Methods for integration of transcriptomic data in genome-scale metabolic models.Investigation on metabolism of cisplatin resistant ovarian cancer using a genome scale metabolic model and microarray data A Method to Constrain Genome-Scale Models with 13C Labeling Data.Transcriptomic and metabolomic data integration.OM-FBA: Integrate Transcriptomics Data with Flux Balance Analysis to Decipher the Cell Metabolism OptORF: Optimal metabolic and regulatory perturbations for metabolic engineering of microbial strains.Systems-biology dissection of eukaryotic cell growth Flux-Enabled Exploration of the Role of Sip1 in Galactose Yeast Metabolism An automated phenotype-driven approach (GeneForce) for refining metabolic and regulatory models.Bridging the gap between gene expression and metabolic phenotype via kinetic models Contribution of network connectivity in determining the relationship between gene expression and metabolite concentration changes.Source and regulation of flux variability in Escherichia coli.Metabolome searcher: a high throughput tool for metabolite identification and metabolic pathway mapping directly from mass spectrometry and using genome restriction The effect of short-term hypoxic exposure on metabolic gene expression.Context-Specific Metabolic Model Extraction Based on Regularized Least Squares Optimization.Integrated in silico Analyses of Regulatory and Metabolic Networks of Synechococcus sp. PCC 7002 Reveal Relationships between Gene Centrality and Essentiality Modular pathway rewiring of Saccharomyces cerevisiae enables high-level production of L-ornithine.Functional genomics tools applied to plant metabolism: a survey on plant respiration, its connections and the annotation of complex gene functions.Complex systems: from chemistry to systems biology.Mapping condition-dependent regulation of lipid metabolism in Saccharomyces cerevisiae 13C Metabolic Flux Analysis for Systematic Metabolic Engineering of S. cerevisiae for Overproduction of Fatty Acids.Topological augmentation to infer hidden processes in biological systems.Eukaryotic and archaeal translation initiation factor 2: a heterotrimeric tRNA carrier.Synthetic biology: tools to design, build, and optimize cellular processes.Systems metabolic engineering: genome-scale models and beyond.Toward design-based engineering of industrial microbes.Metabolomics in systems microbiology

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P2860

Linking high-resolution metabolic flux phenotypes and transcriptional regulation in yeast modulated by the global regulator Gcn4p.

http://www.wikidata.org/entity/Q37167828

description

article científic

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article scientifique

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articolo scientifico

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artigo científico

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bilimsel makale

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scientific article published on 03 April 2009

@en

vedecký článok

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vetenskaplig artikel

@sv

videnskabelig artikel

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vědecký článek

@cs

name

Linking high-resolution metabo ...... by the global regulator Gcn4p.

@en

Linking high-resolution metabo ...... by the global regulator Gcn4p.

@nl

type

label

Linking high-resolution metabo ...... by the global regulator Gcn4p.

@en

Linking high-resolution metabo ...... by the global regulator Gcn4p.

@nl

prefLabel

Linking high-resolution metabo ...... by the global regulator Gcn4p.

@en

Linking high-resolution metabo ...... by the global regulator Gcn4p.

@nl

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PNAS.0811091106

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Proceedings of the National Academy of Sciences of the United States of America

P1476

Linking high-resolution metabo ...... by the global regulator Gcn4p.

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P2093

Alan G Hinnebusch

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Gregory Stephanopoulos

http://www.w3.org/2001/XMLSchema#string

Hal Alper

http://www.w3.org/2001/XMLSchema#string

Joel F Moxley

http://www.w3.org/2001/XMLSchema#string

Lily Tong

http://www.w3.org/2001/XMLSchema#string

Michael C Jewett

http://www.w3.org/2001/XMLSchema#string

Robert T Wheeler

http://www.w3.org/2001/XMLSchema#string

Trey Ideker

http://www.w3.org/2001/XMLSchema#string

P2860

Cytoscape: a software environment for integrated models of biomolecular interaction networks

The Biomolecular Interaction Network Database and related tools 2005 update

A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae

Transcriptional regulatory networks in Saccharomyces cerevisiae

Regulation of gene expression by a metabolic enzyme.

Transcriptional induction by aromatic amino acids in Saccharomyces cerevisiae.

Central carbon metabolism of Saccharomyces cerevisiae explored by biosynthetic fractional (13)C labeling of common amino acids.

Transcriptional regulatory code of a eukaryotic genome.

Ribosome occupancy of the yeast CPA1 upstream open reading frame termination codon modulates nonsense-mediated mRNA decay.

Correlation between protein and mRNA abundance in yeast

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scholarly article

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10.1073/PNAS.0811091106

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16

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Maciek R Antoniewicz

Silas Villas-Boas

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24257836

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19346491

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