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Prevalence of transcription promoters within archaeal operons and coding sequences.

Prevalence of transcription promoters within archaeal operons and coding sequences.

http://www.wikidata.org/entity/Q37262286

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Transcription start site associated RNAs (TSSaRNAs) are ubiquitous in all domains of life The genome organization of Thermotoga maritima reflects its lifestyle The transcriptional landscape of the deep-sea bacterium Photobacterium profundum in both a toxR mutant and its parental strain How do haloarchaea synthesize aromatic amino acids?Architecture for interoperable software in biology Comprehensive analysis of the Corynebacterium glutamicum transcriptome using an improved RNAseq technique Genome-wide identification of transcriptional start sites in the haloarchaeon Haloferax volcanii based on differential RNA-Seq (dRNA-Seq)Primary transcriptome map of the hyperthermophilic archaeon Thermococcus kodakarensis Complete genome and transcriptomes of Streptococcus parasanguinis FW213: phylogenic relations and potential virulence mechanisms Directional RNA-seq reveals highly complex condition-dependent transcriptomes in E. coli K12 through accurate full-length transcripts assembling.A single-base resolution map of an archaeal transcriptome.Large scale physiological readjustment during growth enables rapid, comprehensive and inexpensive systems analysis.Integration and visualization of systems biology data in context of the genome Strand-specific transcriptome profiling with directly labeled RNA on genomic tiling microarrays.Strand-specific deep sequencing of the transcriptome A small basic protein from the brz-brb operon is involved in regulation of bop transcription in Halobacterium salinarum.Structural and operational complexity of the Geobacter sulfurreducens genome.Genome-wide identification of transcriptional start sites in the plant pathogen Pseudomonas syringae pv. tomato str. DC3000.CodingMotif: exact determination of overrepresented nucleotide motifs in coding sequences Conservation of transcription start sites within genes across a bacterial genus.Unravelling the transcriptome profile of the Swine respiratory tract mycoplasmas.The RosR transcription factor is required for gene expression dynamics in response to extreme oxidative stress in a hypersaline-adapted archaeon The single-nucleotide resolution transcriptome of Pseudomonas aeruginosa grown in body temperature.Evolution of context dependent regulation by expansion of feast/famine regulatory proteins Two transcription factors are necessary for iron homeostasis in a salt-dwelling archaeon.A system-level model for the microbial regulatory genome Transcriptome dynamics-based operon prediction in prokaryotes.Evidence-based annotation of transcripts and proteins in the sulfate-reducing bacterium Desulfovibrio vulgaris Hildenborough.Parallel evolution of transcriptome architecture during genome reorganization.A regulatory hierarchy controls the dynamic transcriptional response to extreme oxidative stress in archaea Development of New Modular Genetic Tools for Engineering the Halophilic Archaeon Halobacterium salinarum Comprehensive transcriptome analysis of the periodontopathogenic bacterium Porphyromonas gingivalis W83.Niche adaptation by expansion and reprogramming of general transcription factors.Genome-wide binding analysis of the transcriptional regulator TrmBL1 in Pyrococcus furiosus.Systematic mapping of two component response regulators to gene targets in a model sulfate reducing bacterium Coordinated regulation of acid resistance in Escherichia coli.Revisiting operons: an analysis of the landscape of transcriptional units in E. coli Protein-DNA binding dynamics predict transcriptional response to nutrients in archaea.A single transcription factor regulates evolutionarily diverse but functionally linked metabolic pathways in response to nutrient availability.Analysis of the transcriptional regulator GlpR, promoter elements, and posttranscriptional processing involved in fructose-induced activation of the phosphoenolpyruvate-dependent sugar phosphotransferase system in Haloferax mediterranei.

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Prevalence of transcription promoters within archaeal operons and coding sequences.

http://www.wikidata.org/entity/Q37262286

description

article científic

@ca

article scientifique

@fr

articolo scientifico

@it

artigo científico

@pt

bilimsel makale

@tr

scientific article published on 16 June 2009

@en

vedecký článok

@sk

vetenskaplig artikel

@sv

videnskabelig artikel

@da

vědecký článek

@cs

name

Prevalence of transcription promoters within archaeal operons and coding sequences.

@en

Prevalence of transcription promoters within archaeal operons and coding sequences.

@nl

type

label

Prevalence of transcription promoters within archaeal operons and coding sequences.

@en

Prevalence of transcription promoters within archaeal operons and coding sequences.

@nl

prefLabel

Prevalence of transcription promoters within archaeal operons and coding sequences.

@en

Prevalence of transcription promoters within archaeal operons and coding sequences.

@nl

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Molecular Systems Biology

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Prevalence of transcription promoters within archaeal operons and coding sequences

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Abhishek Pratap

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Amelia Peterson

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Amy K Schmid

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Bruz Marzolf

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Dan Martin

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David J Reiss

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Eric W Deutsch

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Fang-Yin Lo

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Marc T Facciotti

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Min Pan

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P2860

Large-scale mapping and validation of Escherichia coli transcriptional regulation from a compendium of expression profiles

Integrated biclustering of heterogeneous genome-wide datasets for the inference of global regulatory networks

Genome sequence of Halobacterium species NRC-1

Evolution in the laboratory: The genome of Halobacterium salinarum strain R1 compared to that of strain NRC-1

Identification of 86 candidates for small non-messenger RNAs from the archaeon Archaeoglobus fulgidus.

The transcriptional landscape of the yeast genome defined by RNA sequencing

A novel method for accurate operon predictions in all sequenced prokaryotes

The X-ray crystal structure of RNA polymerase from Archaea

Transcriptional regulatory networks in Saccharomyces cerevisiae

Genome-wide location and function of DNA binding proteins

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scholarly article

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10.1038/MSB.2009.42

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5

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J. Christopher Bare

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2009-06-16T00:00:00Z

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26301158

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19536208

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2710873

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