Coupling a genome-scale metabolic model with a reactive transport model to describe in situ uranium bioremediation.
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The genome of Geobacter bemidjiensis, exemplar for the subsurface clade of Geobacter species that predominate in Fe(III)-reducing subsurface environmentsMetabolic Network Modeling of Microbial Interactions in Natural and Engineered Environmental SystemsSynthetic Ecology of Microbes: Mathematical Models and ApplicationsUsing Genome-scale Models to Predict Biological CapabilitiesApplications of genome-scale metabolic reconstructions.Evaluation of a genome-scale in silico metabolic model for Geobacter metallireducens by using proteomic data from a field biostimulation experiment.Metabolic resource allocation in individual microbes determines ecosystem interactions and spatial dynamicsSemi-automated curation of metabolic models via flux balance analysis: a case study with Mycoplasma gallisepticumEvidence of Geobacter-associated phage in a uranium-contaminated aquifer.Spatial aspects in biological system simulationsMetabolic modeling of a chronic wound biofilm consortium predicts spatial partitioning of bacterial species.Molecular analysis of the in situ growth rates of subsurface Geobacter species.Enrichment of specific protozoan populations during in situ bioremediation of uranium-contaminated groundwaterProteogenomic monitoring of Geobacter physiology during stimulated uranium bioremediation.Gene-centric approach to integrating environmental genomics and biogeochemical models.Modeling microbial growth and dynamics.Toward quantitative understanding on microbial community structure and functioning: a modeling-centered approach using degradation of marine oil spills as example.Genome-scale modelling of microbial metabolism with temporal and spatial resolution.Thermodynamic analysis of regulation in metabolic networks using constraint-based modeling.Laboratory evolution of Geobacter sulfurreducens for enhanced growth on lactate via a single-base-pair substitution in a transcriptional regulator.Genome-scale dynamic modeling of the competition between Rhodoferax and Geobacter in anoxic subsurface environments.Bioremediation, a broad perspective.From Genes to Ecosystems in Microbiology: Modeling Approaches and the Importance of Individuality.Model-based analysis of the role of biological, hydrological and geochemical factors affecting uranium bioremediation.Metabolic modeling of spatial heterogeneity of biofilms in microbial fuel cells reveals substrate limitations in electrical current generation.New molecular techniques for pathogen analysis, in silico determination of RND efflux pump substrate specificity, shotgun proteomic monitoring of bioremediation and yeast bio-applicationsExplicitly representing soil microbial processes in Earth system modelsA low-complexity metabolic network model for the respiratory and fermentative metabolism of Escherichia coli
P2860
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P2860
Coupling a genome-scale metabolic model with a reactive transport model to describe in situ uranium bioremediation.
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article científic
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article scientifique
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articolo scientifico
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artigo científico
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bilimsel makale
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scientific article published on March 2009
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vedecký článok
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vetenskaplig artikel
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videnskabelig artikel
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vědecký článek
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name
Coupling a genome-scale metabo ...... n situ uranium bioremediation.
@en
Coupling a genome-scale metabo ...... n situ uranium bioremediation.
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type
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Coupling a genome-scale metabo ...... n situ uranium bioremediation.
@en
Coupling a genome-scale metabo ...... n situ uranium bioremediation.
@nl
prefLabel
Coupling a genome-scale metabo ...... n situ uranium bioremediation.
@en
Coupling a genome-scale metabo ...... n situ uranium bioremediation.
@nl
P2093
P2860
P1476
Coupling a genome-scale metabo ...... in situ uranium bioremediation
@en
P2093
Philip E Long
Radhakrishnan Mahadevan
Srinath Garg
Yilin Fang
P2860
P304
P356
10.1111/J.1751-7915.2009.00087.X
P577
2009-03-01T00:00:00Z