The structure of DNA overstretched from the 5'5' ends differs from the structure of DNA overstretched from the 3'3' ends.
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Modeling the early stage of DNA sequence recognition within RecA nucleoprotein filaments.PicoNewton-millisecond force steps reveal the transition kinetics and mechanism of the double-stranded DNA elongation.Biophysical characterization of DNA binding from single molecule force measurementsUndulations enhance the effect of helical structure on DNA interactions.Single-molecule stretching studies of RNA chaperones.Transition dynamics and selection of the distinct S-DNA and strand unpeeling modes of double helix overstretching.Single-molecule studies of the stringency factors and rates governing the polymerization of RecA on double-stranded DNA.RecA homology search is promoted by mechanical stress along the scanned duplex DNA.Improved high-force magnetic tweezers for stretching and refolding of proteins and short DNAThe poor homology stringency in the heteroduplex allows strand exchange to incorporate desirable mismatches without sacrificing recognition in vivo.Two distinct overstretched DNA structures revealed by single-molecule thermodynamics measurements.Tension induces a base-paired overstretched DNA conformation.Complementary strand relocation may play vital roles in RecA-based homology recognition.Study of force induced melting of dsDNA as a function of length and conformation.B-DNA to zip-DNA: simulating a DNA transition to a novel structure with enhanced charge-transport characteristicsPeeling back the mystery of DNA overstretching.Single molecule identification of homology-dependent interactions between long ssRNA and dsDNA.Magnetic force micropiston: an integrated force/microfluidic device for the application of compressive forces in a confined environment.Rupture of DNA aptamer: New insights from simulations.Changes in the tension in dsDNA alter the conformation of RecA bound to dsDNA-RecA filaments.Force-induced melting of DNA--evidence for peeling and internal melting from force spectra on short synthetic duplex sequences.An effective mesoscopic model of double-stranded DNA.DNA stretching as a probe for nucleic acid interactions: Reply to Comments on "Biophysical characterization of DNA binding from single molecule force measurements" by Kathy R. Chaurasiya, Thayaparan Paramanathan, Micah J. McCauley, Mark C. Williams.Single-molecule mechanics of protein-labelled DNA handles.Quantitative modeling of forces in electromagnetic tweezers.Statistical mechanics of DNA rupture: theory and simulations.Freezing shortens the lifetime of DNA molecules under tension.A stretched conformation of DNA with a biological role?DNA partitions into triplets under tension in the presence of organic cations, with sequence evolutionary age predicting the stability of the triplet phase.On the rupture of DNA molecule.Overstretching of B-DNA with various pulling protocols: Appearance of structural polymorphism and S-DNA.Direct observation of multiple pathways of single-stranded DNA stretching.Manipulation of double-stranded DNA melting by force.Coarse-grained simulations of DNA overstretching.The probability analysis of opening of DNA.
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P2860
The structure of DNA overstretched from the 5'5' ends differs from the structure of DNA overstretched from the 3'3' ends.
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article científic
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article scientifique
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articolo scientifico
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artigo científico
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bilimsel makale
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scientific article published on 28 July 2009
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vedecký článok
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vetenskaplig artikel
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videnskabelig artikel
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vědecký článek
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name
The structure of DNA overstret ...... rstretched from the 3'3' ends.
@en
The structure of DNA overstret ...... rstretched from the 3'3' ends.
@nl
type
label
The structure of DNA overstret ...... rstretched from the 3'3' ends.
@en
The structure of DNA overstret ...... rstretched from the 3'3' ends.
@nl
prefLabel
The structure of DNA overstret ...... rstretched from the 3'3' ends.
@en
The structure of DNA overstret ...... rstretched from the 3'3' ends.
@nl
P2093
P2860
P356
P1476
The structure of DNA overstret ...... erstretched from the 3'3' ends
@en
P2093
Alyson Conover
Charles Limouse
Claudia Danilowicz
Kristi Hatch
Mara Prentiss
Vincent W Coljee
P2860
P304
13196-13201
P356
10.1073/PNAS.0904729106
P407
P577
2009-07-28T00:00:00Z