Genome-wide probing of RNA structure reveals active unfolding of mRNA structures in vivo. - Wikidata - wikimedia - TriplyDB

Genome-wide probing of RNA structure reveals active unfolding of mRNA structures in vivo.

Genome-wide probing of RNA structure reveals active unfolding of mRNA structures in vivo.

http://www.wikidata.org/entity/Q37664924

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N(6)-methyladenosine-dependent RNA structural switches regulate RNA-protein interactions The 5' and 3' ends of alphavirus RNAs--Non-coding is not non-functional The organization and regulation of mRNA-protein complexes RNA-Seq methods for transcriptome analysis Understanding the Functions of Long Non-Coding RNAs through Their Higher-Order Structures RNA systems biology: uniting functional discoveries and structural tools to understand global roles of RNAs RNA recognition by Roquin in posttranscriptional gene regulation Paradigms of ribosome synthesis: Lessons learned from ribosomal proteins MECHANISMS IN ENDOCRINOLOGY: Alternative splicing: the new frontier in diabetes research Specificity and nonspecificity in RNA-protein interactions Decoding mechanisms by which silent codon changes influence protein biogenesis and function RNA structural analysis by evolving SHAPE chemistry Long non-coding RNAs as regulators of the endocrine system Circadian genomics reveal a role for post-transcriptional regulation in mammals High-throughput characterization of protein-RNA interactions Single-cell RNA-seq: advances and future challenges Alternative polyadenylation in the nervous system: to what lengths will 3' UTR extensions take us?DEAD-box helicase proteins disrupt RNA tertiary structure through helix capture Simultaneous characterization of cellular RNA structure and function with in-cell SHAPE-Seq Progress and challenges for chemical probing of RNA structure inside living cells Roquin recognizes a non-canonical hexaloop structure in the 3'-UTR of Ox40 HNRNPA2B1 Is a Mediator of m(6)A-Dependent Nuclear RNA Processing Events Context-dependent control of alternative splicing by RNA-binding proteins Probing Xist RNA Structure in Cells Using Targeted Structure-Seq Transcending the prediction paradigm: novel applications of SHAPE to RNA function and evolution Tunable protein synthesis by transcript isoforms in human cells Standardization of RNA chemical mapping experiments FoldAtlas: a repository for genome-wide RNA structure probing data Chemical Tools for Dissecting the Role of lncRNAs in Epigenetic Regulation Transcriptome-wide interrogation of RNA secondary structure in living cells with icSHAPE Challenge of mimicking the influences of the cellular environment on RNA structure by PEG-induced macromolecular crowding 3D RNA and Functional Interactions from Evolutionary Couplings RNA Duplex Map in Living Cells Reveals Higher-Order Transcriptome Structure Quantitative imaging of single mRNA splice variants in living cells Accounting for biases in riboprofiling data indicates a major role for proline in stalling translation.Computational analysis of RNA structures with chemical probing data.SHAPE Selection (SHAPES) enrich for RNA structure signal in SHAPE sequencing-based probing data Improved prediction of RNA secondary structure by integrating the free energy model with restraints derived from experimental probing data RNA structure framework: automated transcriptome-wide reconstruction of RNA secondary structures from high-throughput structure probing data.Analysis of sequencing data for probing RNA secondary structures and protein-RNA binding in studying posttranscriptional regulations.

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Genome-wide probing of RNA structure reveals active unfolding of mRNA structures in vivo.

http://www.wikidata.org/entity/Q37664924

description

article científic

@ca

article scientifique

@fr

articolo scientifico

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artigo científico

@pt

bilimsel makale

@tr

scientific article published on 15 December 2013

@en

vedecký článok

@sk

vetenskaplig artikel

@sv

videnskabelig artikel

@da

vědecký článek

@cs

name

Genome-wide probing of RNA structure reveals active unfolding of mRNA structures in vivo.

@en

Genome-wide probing of RNA structure reveals active unfolding of mRNA structures in vivo.

@nl

type

label

Genome-wide probing of RNA structure reveals active unfolding of mRNA structures in vivo.

@en

Genome-wide probing of RNA structure reveals active unfolding of mRNA structures in vivo.

@nl

prefLabel

Genome-wide probing of RNA structure reveals active unfolding of mRNA structures in vivo.

@en

Genome-wide probing of RNA structure reveals active unfolding of mRNA structures in vivo.

@nl

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Genome-wide probing of RNA structure reveals active unfolding of mRNA structures in vivo.

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Meghan Zubradt

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Silvi Rouskin

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Stefan Washietl

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P2860

RNAalifold: improved consensus structure prediction for RNA alignments.

Mfold web server for nucleic acid folding and hybridization prediction

Fast and reliable prediction of noncoding RNAs

Multiplexed RNA structure characterization with selective 2'-hydroxyl acylation analyzed by primer extension sequencing (SHAPE-Seq)

Translation on demand by a simple RNA-based thermosensor

The transcriptional landscape of the yeast genome defined by RNA sequencing

The ribosome profiling strategy for monitoring translation in vivo by deep sequencing of ribosome-protected mRNA fragments

Accurate SHAPE-directed RNA structure determination

Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling

Structural diversity of self-cleaving ribozymes

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701-705

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scholarly article

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10.1038/NATURE12894

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7485

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505

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Jonathan Weissman

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2013-12-15T00:00:00Z

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259321035

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1031549764

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24336214

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3966492

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