Assembly of large genomes using second-generation sequencing.
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Augmenting transcriptome assembly by combining de novo and genome-guided toolsThe Oxytricha trifallax macronuclear genome: a complex eukaryotic genome with 16,000 tiny chromosomesGenome sequence of the insect pathogenic fungus Cordyceps militaris, a valued traditional Chinese medicineTranslational biomedical informatics in the cloud: present and futureSequencing and assembly of the 22-gb loblolly pine genomeRepetitive DNA and next-generation sequencing: computational challenges and solutionsAdvances in BAC-based physical mapping and map integration strategies in plantsA field guide to whole-genome sequencing, assembly and annotationNew Approaches to Comparative and Animal Stress Biology Research in the Post-genomic Era: A Contextual OverviewAlgorithms in nature: the convergence of systems biology and computational thinkingDevelopmental gene discovery in a hemimetabolous insect: de novo assembly and annotation of a transcriptome for the cricket Gryllus bimaculatusOxford Nanopore MinION Sequencing and Genome AssemblyHybrid error correction and de novo assembly of single-molecule sequencing readsDeep sequencing of Danish Holstein dairy cattle for variant detection and insight into potential loss-of-function variants in protein coding genesDraft sequencing and analysis of the genome of pufferfish Takifugu flavidusMetagenomic analysis reveals presence of Treponema denticola in a tissue biopsy of the IcemanEvaluation of genome sequencing quality in selected plant species using expressed sequence tagsCephalopod genomics: A plan of strategies and organizationCapturing chloroplast variation for molecular ecology studies: a simple next generation sequencing approach applied to a rainforest tree.Design, validation and annotation of transcriptome-wide oligonucleotide probes for the oligochaete annelid Eisenia fetidaHow to apply de Bruijn graphs to genome assemblyNavigating Microbiological Food Safety in the Era of Whole-Genome SequencingOptimized Illumina PCR-free library preparation for bacterial whole genome sequencing and analysis of factors influencing de novo assemblyA pilot study for channel catfish whole genome sequencing and de novo assembly.Illumina mate-paired DNA sequencing-library preparation using Cre-Lox recombination.Elucidating and mining the Tulipa and Lilium transcriptomes.De novo transcriptomic analyses for non-model organisms: an evaluation of methods across a multi-species data set.Identification of optimum sequencing depth especially for de novo genome assembly of small genomes using next generation sequencing data.Computational solutions for omics data.DDBJ read annotation pipeline: a cloud computing-based pipeline for high-throughput analysis of next-generation sequencing dataAssembly and comparative analysis of transposable elements from low coverage genomic sequence data in Asparagales.De novo sequence assembly and characterization of the floral transcriptome in cross- and self-fertilizing plants.An NGS Workflow Blueprint for DNA Sequencing Data and Its Application in Individualized Molecular Oncology.ITD assembler: an algorithm for internal tandem duplication discovery from short-read sequencing data.A pipeline for local assembly of minisatellite alleles from single-molecule sequencing data.Integrating transcriptomic and proteomic data for accurate assembly and annotation of genomes.Genome puzzle master (GPM): an integrated pipeline for building and editing pseudomolecules from fragmented sequencesShort Read Mapping: An Algorithmic Tour.Why assembling plant genome sequences is so challengingThe combination of direct and paired link graphs can boost repetitive genome assembly.
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Assembly of large genomes using second-generation sequencing.
description
article científic
@ca
article scientifique
@fr
articolo scientifico
@it
artigo científico
@pt
bilimsel makale
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scientific article published on 27 May 2010
@en
vedecký článok
@sk
vetenskaplig artikel
@sv
videnskabelig artikel
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vědecký článek
@cs
name
Assembly of large genomes using second-generation sequencing.
@en
Assembly of large genomes using second-generation sequencing.
@nl
type
label
Assembly of large genomes using second-generation sequencing.
@en
Assembly of large genomes using second-generation sequencing.
@nl
prefLabel
Assembly of large genomes using second-generation sequencing.
@en
Assembly of large genomes using second-generation sequencing.
@nl
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P356
P1433
P1476
Assembly of large genomes using second-generation sequencing.
@en
P2093
Arthur L Delcher
P2860
P304
P356
10.1101/GR.101360.109
P577
2010-05-27T00:00:00Z