High-throughput sequencing and clinical microbiology: progress, opportunities and challenges.
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"Genotype-first" approaches on a curious case of idiopathic progressive cognitive declineThe Challenge and Potential of Metagenomics in the ClinicFecal biomarkers of intestinal health and disease in childrenRNA-seq-based metatranscriptomic and microscopic investigation reveals novel metalloproteases of Neobodo sp. as potential virulence factors for soft tunic syndrome in Halocynthia roretziRole of Clinicogenomics in Infectious Disease Diagnostics and Public Health MicrobiologyIdentifying disease mutations in genomic medicine settings: current challenges and how to accelerate progressBioinformatic genome comparisons for taxonomic and phylogenetic assignments using Aeromonas as a test caseAnalysis of the transcriptome of the Indonesian coelacanth Latimeria menadoensisRoutine use of microbial whole genome sequencing in diagnostic and public health microbiologySurveillance of infection severity: a registry study of laboratory diagnosed Clostridium difficileRecent "omics" advances in Helicobacter pylori.The role of epidemic resistance plasmids and international high-risk clones in the spread of multidrug-resistant Enterobacteriaceae.Bridging the gap between the technological singularity and mainstream medicine: highlighting a course on technology and the future of medicineData- and knowledge-based modeling of gene regulatory networks: an update.Efficient depletion of host DNA contamination in malaria clinical sequencing.Genomic variation in Salmonella enterica core genes for epidemiological typing.Performance comparison of benchtop high-throughput sequencing platforms.Next-generation and whole-genome sequencing in the diagnostic clinical microbiology laboratory.A platform-independent method for detecting errors in metagenomic sequencing data: DRISEE.Short term evolution of a highly transmissible methicillin-resistant Staphylococcus aureus clone (ST228) in a tertiary care hospital.KvarQ: targeted and direct variant calling from fastq reads of bacterial genomes.The single-nucleotide resolution transcriptome of Pseudomonas aeruginosa grown in body temperature.The dormant blood microbiome in chronic, inflammatory diseases.SRST2: Rapid genomic surveillance for public health and hospital microbiology labs.High-Throughput Sequencing, a VersatileWeapon to Support Genome-Based Diagnosis in Infectious Diseases: Applications to Clinical BacteriologyAutomated extraction of typing information for bacterial pathogens from whole genome sequence data: Neisseria meningitidis as an exemplar.Simultaneous quantification of multiple bacteria by the BactoChip microarray designed to target species-specific marker genes.Microbial genomics and infectious diseases.A global transcriptional switch between the attack and growth forms of Bdellovibrio bacteriovorus.Clonal expansion within pneumococcal serotype 6C after use of seven-valent vaccine.Characterizing the genetic basis of bacterial phenotypes using genome-wide association studies: a new direction for bacteriologyFecal Bacterial Composition of the Endangered Yangtze Finless Porpoises Living Under Captive and Semi-natural Conditions.Rapid, culture-independent, optical diagnostics of centrifugally captured bacteria from urine samplesFunctional Genome Screening to Elucidate the Colistin Resistance Mechanism.Comparison of TaqMan PCR assays for detection of the melioidosis agent Burkholderia pseudomallei in clinical specimensIt Is Not All about Single Nucleotide Polymorphisms: Comparison of Mobile Genetic Elements and Deletions in Listeria monocytogenes Genomes Links Cases of Hospital-Acquired Listeriosis to the Environmental Source.Pathogenic characterization of a cervical lymph node derived from a patient with Kawasaki disease.Direct next-generation sequencing of virus-human mixed samples without pretreatment is favorable to recover virus genome.Recombinational switching of the Clostridium difficile S-layer and a novel glycosylation gene cluster revealed by large-scale whole-genome sequencing.Utility of Whole-Genome Sequencing in Characterizing Acinetobacter Epidemiology and Analyzing Hospital Outbreaks
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High-throughput sequencing and clinical microbiology: progress, opportunities and challenges.
description
article científic
@ca
article scientifique
@fr
articolo scientifico
@it
artigo científico
@pt
bilimsel makale
@tr
scientific article published on 16 September 2010
@en
vedecký článok
@sk
vetenskaplig artikel
@sv
videnskabelig artikel
@da
vědecký článek
@cs
name
High-throughput sequencing and ...... opportunities and challenges.
@en
High-throughput sequencing and ...... opportunities and challenges.
@nl
type
label
High-throughput sequencing and ...... opportunities and challenges.
@en
High-throughput sequencing and ...... opportunities and challenges.
@nl
prefLabel
High-throughput sequencing and ...... opportunities and challenges.
@en
High-throughput sequencing and ...... opportunities and challenges.
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P1476
High-throughput sequencing and ...... opportunities and challenges.
@en
P2093
Charles W Penn
P304
P356
10.1016/J.MIB.2010.08.003
P577
2010-09-16T00:00:00Z