Pathogen typing in the genomics era: MLST and the future of molecular epidemiology.
about
A comparison of two informative SNP-based strategies for typing Pseudomonas aeruginosa isolates from patients with cystic fibrosisThe Promise of Whole Genome Pathogen Sequencing for the Molecular Epidemiology of Emerging Aquaculture Pathogens.Evaluation of a Method Using Three Genomic Guided Escherichia coli Markers for Phylogenetic Typing of E. coli Isolates of Various Genetic BackgroundsCronobacter, the emergent bacterial pathogen Enterobacter sakazakii comes of age; MLST and whole genome sequence analysis.Uncovering Differences in Virulence Markers Associated with Achromobacter Species of CF and Non-CF Origin.A Comprehensive Epidemiological Research for Clinical Vibrio parahaemolyticus in Shanghai.Molecular epidemiology of Streptococcus agalactiae isolated from mastitis in Brazilian dairy herds.Multilocus sequence analysis of the marine bacterial genus Tenacibaculum suggests parallel evolution of fish pathogenicity and endemic colonization of aquaculture systems.Population structure of clinical Pseudomonas aeruginosa from West and Central African countries.Recent advances in understanding enteric pathogenic Escherichia coli.New multilocus variable-number tandem-repeat analysis tool for surveillance and local epidemiology of bacterial leaf blight and bacterial leaf streak of rice caused by Xanthomonas oryzae.Multilocus sequence typing of Mycobacterium xenopiLactococcus garvieae: where is it from? A first approach to explore the evolutionary history of this emerging pathogen.Concordance and discordance of sequence survey methods for molecular epidemiologyUsing multilocus sequence typing to study bacterial variation: prospects in the genomic era.The Diversity and Geographical Structure of Orientia tsutsugamushi Strains from Scrub Typhus Patients in Laos.A New Comparative-Genomics Approach for Defining Phenotype-Specific Indicators Reveals Specific Genetic Markers in Predatory Bacteria.Aggressive Emerging Pathovars of Xanthomonas arboricola Represent Widespread Epidemic Clones Distinct from Poorly Pathogenic Strains, as Revealed by Multilocus Sequence TypingMetaMLST: multi-locus strain-level bacterial typing from metagenomic samples.A Robust Framework for Microbial Archaeology.BacWGSTdb, a database for genotyping and source tracking bacterial pathogens.A Novel 7-Single Nucleotide Polymorphism-Based Clonotyping Test Allows Rapid Prediction of Antimicrobial Susceptibility of Extraintestinal Escherichia coli Directly From Urine SpecimensGenomics and outbreak investigation: from sequence to consequence.The impact of protein-conjugate polysaccharide vaccines: an endgame for meningitis?Microbial bioinformatics 2020.Development and evaluation of a core genome multilocus typing scheme for whole-genome sequence-based typing of Acinetobacter baumanniiThe evolutionary history and diagnostic utility of the CRISPR-Cas system within Salmonella enterica ssp. enterica.Whole genome multilocus sequence typing as an epidemiologic tool for Yersinia pestis.Molecular Characterization and Phylogenetic Analysis of Pseudomonas aeruginosa Isolates Recovered from Greek Aquatic Habitats Implementing the Double-Locus Sequence Typing Scheme.Examination of clinical and environmental Vibrio parahaemolyticus isolates by multi-locus sequence typing (MLST) and multiple-locus variable-number tandem-repeat analysis (MLVA).Intrafamilial, Preferentially Mother-to-Child and Intraspousal, Helicobacter pylori Infection in Japan Determined by Mutilocus Sequence Typing and Random Amplified Polymorphic DNA Fingerprinting.Epidemiological characterization of a nosocomial outbreak of extended spectrum β-lactamase Escherichia coli ST-131 confirms the clinical value of core genome multilocus sequence typing.Core Genome Multilocus Sequence Typing (cgMLST): A Standardized Approach for Molecular Typing of Mycoplasma gallisepticum.MLST revisited: the gene-by-gene approach to bacterial genomics.Molecular Characteristics of ST1193 Clone among Phylogenetic Group B2 Non-ST131 Fluoroquinolone-Resistant Escherichia coli.Next-generation sequencing applications in clinical bacteriology.Statement on diversity of Xylella fastidiosa subsp. pauca in ApuliaPhenotypic and Genotypic Eligible Methods for Salmonella Typhimurium Source Tracking.Microbial sequence typing in the genomic era.Survey of Victorian small ruminant herds for mycoplasmas associated with contagious agalactia and molecular characterisation of Mycoplasma mycoides subspecies capri isolates from one herd.
P2860
Q21261806-7CA8B885-A9DB-4148-A708-98BEB4CBEEFEQ30235852-D5DBB488-FBA8-445B-89F9-99D46FE1B479Q30373052-ECCF5725-20A7-430D-9427-71DF7CE56BA0Q30487503-4558B3FA-BC3C-44CA-AE83-7FA23DD2F687Q33734879-B805B12A-7B53-4171-B63C-704EE90DDAC6Q33774674-5E53C478-5A56-4A7A-B40A-B0725934CEFBQ33875178-1BE25576-3F2B-409A-97E7-670914A9550BQ34058425-2ACB9E9B-FD97-4DCD-8A14-EC044B31720EQ34134267-428E1748-9ED9-4205-8276-BDABBC235432Q34375210-F5E9F4F3-9E07-46A0-A9B1-8BB525BC0778Q34777585-EB059DA6-B5A6-40E9-B949-ADA1215419B5Q35036016-916913EC-5C10-4DBC-9B88-66E96ECE1A8EQ35083038-8BBF098D-C069-4980-B00E-86B2E0915EC4Q35115261-31B13FF0-1199-4F3A-B144-C43AFC2343D2Q35193523-03A4B4AA-6D6F-4955-B6AC-E657F072351BQ35758908-6372EB4B-E221-440F-BB79-B860A527F822Q35841730-2E1C6EEB-0D38-4B99-82D2-029A90647535Q36000309-49198260-CB46-4100-945E-CC527F3FDFC1Q36139108-AB97D3B0-83E0-4770-93C3-E8FF5C54EE54Q36359875-E6B74B09-C40E-4B1C-88CC-A0F5831BFB61Q36434539-1D4CADF4-8CA3-467A-BDCB-5E3A51D8A1D9Q36615534-26C11622-C917-4BD7-861B-448453D42235Q36998465-59414805-5C11-446E-ADFF-B68DEB9AFA9FQ37037419-7DB4DC56-5D2B-4FAC-BF36-727EAE2112FCQ37194003-32BEB206-E5FA-49FE-BCC6-5974433BF322Q38736293-71AB1773-FE87-4402-B320-57EAD0F54BF8Q38875932-AA525E7F-2228-4F7F-AD2E-5EBD837FF3E1Q40086738-2D0CDAFF-673C-4CD5-B0CE-3A107E2FE948Q40391969-AF7DEC5C-2908-4689-91B5-8B9925472486Q41138562-120B1F8A-A48A-49AE-826D-272FFA55CEC8Q41494306-08EF8F96-FB70-4CB1-BB40-ADC867C14CEBQ41928155-CADD4310-8211-4355-8F96-DFF29B4E1293Q42699165-899DBEAD-C4DA-41C1-9E21-7DAAF82AA871Q43704503-ADBB190F-9372-45F4-A09C-6FBC9D697CC1Q47110796-5112009C-3943-47C4-A239-83BF96463CC7Q47157761-5F8E9171-3E91-4078-AA91-0DBDB71C3149Q47158014-DDE88B08-78F6-4873-8BAB-A24443664AC8Q47194191-73BD3C64-D112-4CC0-9370-1ACF10A60456Q47931137-FAC91BDD-1090-47EB-B69B-D6BE771B3F66Q48289748-A5B74627-13E6-48FE-BC96-409FF70F72FC
P2860
Pathogen typing in the genomics era: MLST and the future of molecular epidemiology.
description
article científic
@ca
article scientifique
@fr
articol științific
@ro
articolo scientifico
@it
artigo científico
@gl
artigo científico
@pt
artigo científico
@pt-br
artikel ilmiah
@id
artikull shkencor
@sq
artículo científico
@es
name
Pathogen typing in the genomics era: MLST and the future of molecular epidemiology.
@en
type
label
Pathogen typing in the genomics era: MLST and the future of molecular epidemiology.
@en
prefLabel
Pathogen typing in the genomics era: MLST and the future of molecular epidemiology.
@en
P1476
Pathogen typing in the genomics era: MLST and the future of molecular epidemiology.
@en
P2093
Marcos Pérez-Losada
Patricia Cabezas
P356
10.1016/J.MEEGID.2013.01.009
P577
2013-01-26T00:00:00Z