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Self-Folding of Naked Segment 8 Genomic RNA of Influenza A VirusMicroRNAs align with accessible sites in target mRNAs.Improvement of RNA secondary structure prediction using RNase H cleavage and randomized oligonucleotides.Chemical synthesis of LNA-2-thiouridine and its influence on stability and selectivity of oligonucleotide binding to RNA.Mapping targetable sites on human telomerase RNA pseudoknot/template domain using 2'-OMe RNA-interacting polynucleotide (RIPtide) microarrays.Contributions of stacking, preorganization, and hydrogen bonding to the thermodynamic stability of duplexes between RNA and 2'-O-methyl RNA with locked nucleic acids.Isoenergetic penta- and hexanucleotide microarray probing and chemical mapping provide a secondary structure model for an RNA element orchestrating R2 retrotransposon protein functionIdentifying and characterizing Hfq-RNA interactions.Microarrays for identifying binding sites and probing structure of RNAs2-Thiouracil deprived of thiocarbonyl function preferentially base pairs with guanine rather than adenine in RNA and DNA duplexesA Conserved Secondary Structural Element in the Coding Region of the Influenza A Virus Nucleoprotein (NP) mRNA Is Important for the Regulation of Viral Proliferation.Isoenergetic microarrays to study the structure and interactions of DsrA and OxyS RNAs in two- and three-component complexes.Efficient Design of Compact Unstructured RNA Libraries Covering All k-mers.Selective quenching of fluorescence from unbound oligonucleotides by gold nanoparticles as a probe of RNA structure.Structural determinants for alternative splicing regulation of the MAPT pre-mRNAEnzymatic synthesis of structure-free DNA with pseudo-complementary properties.Properties of pseudo-complementary DNA substituted with weakly pairing analogs of guanine or cytosineComparisons between chemical mapping and binding to isoenergetic oligonucleotide microarrays reveal unexpected patterns of binding to the Bacillus subtilis RNase P RNA specificity domainRapid determination of RNA accessible sites by surface plasmon resonance detection of hybridization to DNA arrays.Secondary structures for 5' regions of R2 retrotransposon RNAs reveal a novel conserved pseudoknot and regions that evolve under different constraints.Experiment-Assisted Secondary Structure Prediction with RNAstructure.NMR-assisted prediction of RNA secondary structure: identification of a probable pseudoknot in the coding region of an R2 retrotransposonChanges in the conformation of 5S rRNA cause alterations in principal functions of the ribosomal nanomachine.A chemical synthesis of LNA-2,6-diaminopurine riboside, and the influence of 2'-O-methyl-2,6-diaminopurine and LNA-2,6-diaminopurine ribosides on the thermodynamic properties of 2'-O-methyl RNA/RNA heteroduplexes.
P2860
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P2860
description
2006 nî lūn-bûn
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2006年の論文
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2006年学术文章
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2006年学术文章
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2006年学术文章
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name
Facilitating RNA structure prediction with microarrays
@en
type
label
Facilitating RNA structure prediction with microarrays
@en
prefLabel
Facilitating RNA structure prediction with microarrays
@en
P2860
P356
P1433
P1476
Facilitating RNA structure prediction with microarrays
@en
P2093
Elzbieta Kierzek
Irina E Catrina
P2860
P304
P356
10.1021/BI051409+
P407
P577
2006-01-01T00:00:00Z