Preferential associations between co-regulated genes reveal a transcriptional interactome in erythroid cells - Wikidata - wikimedia - TriplyDB

Preferential associations between co-regulated genes reveal a transcriptional interactome in erythroid cells

Preferential associations between co-regulated genes reveal a transcriptional interactome in erythroid cells

http://www.wikidata.org/entity/Q38348005

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A dominant mutation in the gene encoding the erythroid transcription factor KLF1 causes a congenital dyserythropoietic anemia RUNX1 regulates the CD34 gene in haematopoietic stem cells by mediating interactions with a distal regulatory element Kruppel-like factor 1 (KLF1), KLF2, and Myc control a regulatory network essential for embryonic erythropoiesis Condensin and cohesin complexity: the expanding repertoire of functions Spatial Genome Organization and Its Emerging Role as a Potential Diagnosis Tool Roles of long noncoding RNAs in chromosome domains Pairing and anti-pairing: a balancing act in the diploid genome Understanding Spatial Genome Organization: Methods and Insights Krüppeling erythropoiesis: an unexpected broad spectrum of human red blood cell disorders due to KLF1 variants Morphology of nuclear transcription Chromatin Dynamics in Lineage Commitment and Cellular Reprogramming An Overview of Genome Organization and How We Got There: from FISH to Hi-C Large-scale chromatin organization: the good, the surprising, and the still perplexing From stem cell to red cell: regulation of erythropoiesis at multiple levels by multiple proteins, RNAs, and chromatin modifications Disentangling the many layers of eukaryotic transcriptional regulation Chromatin dynamics during cellular reprogramming Promiscuous Gene Expression in the Thymus: A Matter of Epigenetics, miRNA, and More?Pairing of homologous regions in the mouse genome is associated with transcription but not imprinting status Rapid transcriptional pulsing dynamics of high expressing retroviral transgenes in embryonic stem cells Innate structure of DNA foci restricts the mixing of DNA from different chromosome territories Simulated binding of transcription factors to active and inactive regions folds human chromosomes into loops, rosettes and topological domains.Coordinate control of gene expression noise and interchromosomal interactions in a MAP kinase pathway Defining the budding yeast chromatin-associated interactome.Transcription factor binding to a DNA zip code controls interchromosomal clustering at the nuclear periphery.DNA looping facilitates targeting of a chromatin remodeling enzyme.Better Living through Chemistry: Caloric Restriction (CR) and CR Mimetics Alter Genome Function to Promote Increased Health and Lifespan Snaps and mends: DNA breaks and chromosomal translocations The intimate genome… in three dimensions A view of nuclear Polycomb bodies Meet the neighbours: tools to dissect nuclear structure and function Analysis of β-globin chromatin micro-environment using a novel 3C variant, 4Cv Regulation of an antisense RNA with the transition of neonatal to IIb myosin heavy chain during postnatal development and hypothyroidism in rat skeletal muscle Single-cell Hi-C reveals cell-to-cell variability in chromosome structure GREAT improves functional interpretation of cis-regulatory regions Extensive promoter-centered chromatin interactions provide a topological basis for transcription regulation Comparative analysis of 4C-Seq data generated from enzyme-based and sonication-based methods.Genomic positions of co-expressed genes: echoes of chromosome organisation in gene expression data.GenomicInteractions: An R/Bioconductor package for manipulating and investigating chromatin interaction data.A multi-task graph-clustering approach for chromosome conformation capture data sets identifies conserved modules of chromosomal interactions.Genomic interaction profiles in breast cancer reveal altered chromatin architecture.

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Preferential associations between co-regulated genes reveal a transcriptional interactome in erythroid cells

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Preferential associations betw ...... interactome in erythroid cells

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Nature Genetics

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Preferential associations betw ...... interactome in erythroid cells

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Alice Horton

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Chia-Lin Wei

http://www.w3.org/2001/XMLSchema#string

Christopher H Eskiw

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Daniela S Dimitrova

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David Umlauf

http://www.w3.org/2001/XMLSchema#string

James J Bieker

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Lyubomira Chakalova

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Nathan F Cope

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Simon Andrews

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Sreenivasulu Kurukuti

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P2860

Three-dimensional maps of all chromosomes in human male fibroblast nuclei and prometaphase rosettes.

Stochastic mRNA synthesis in mammalian cells

Interchromosomal associations between alternatively expressed loci

Chromatin decondensation and nuclear reorganization of the HoxB locus upon induction of transcription

A novel, erythroid cell-specific murine transcription factor that binds to the CACCC element and is related to the Krüppel family of nuclear proteins

A global role for EKLF in definitive and primitive erythropoiesis

Tissue-specific spatial organization of genomes

Transcriptional pulsing of a developmental gene

Capturing chromosome conformation

Lethal beta-thalassaemia in mice lacking the erythroid CACCC-transcription factor EKLF

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10.1038/NG.496

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1

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42

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Jennifer A. Mitchell

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2009-12-13T00:00:00Z

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40688331

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20010836

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3237402

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