Decay rates of human mRNAs: correlation with functional characteristics and sequence attributes. - Wikidata - wikimedia - TriplyDB

Decay rates of human mRNAs: correlation with functional characteristics and sequence attributes.

Decay rates of human mRNAs: correlation with functional characteristics and sequence attributes.

http://www.wikidata.org/entity/Q38351806

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Diverse RNA-binding proteins interact with functionally related sets of RNAs, suggesting an extensive regulatory system Kinetic signatures of microRNA modes of action Regulation of mRNA export by the PI3 kinase/AKT signal transduction pathway.Ultrasensitization: switch-like regulation of cellular signaling by transcriptional induction A catalog of stability-associated sequence elements in 3' UTRs of yeast mRNAs The RNA silencing pathway: the bits and pieces that matter Evidence for selection on synonymous mutations affecting stability of mRNA secondary structure in mammals The 3' region of human papillomavirus type 16 early mRNAs decrease expression.ARED 3.0: the large and diverse AU-rich transcriptome.Next-generation analysis of gene expression regulation--comparing the roles of synthesis and degradation Regulation of AU-Rich Element RNA Binding Proteins by Phosphorylation and the Prolyl Isomerase Pin1 Global analysis of Pub1p targets reveals a coordinate control of gene expression through modulation of binding and stability Profiling condition-specific, genome-wide regulation of mRNA stability in yeast.Ethanol-induced transcriptional activation of programmed cell death 4 (Pdcd4) is mediated by GSK-3β signaling in rat cortical neuroblasts Systematic analysis of cis-elements in unstable mRNAs demonstrates that CUGBP1 is a key regulator of mRNA decay in muscle cells Robustness analysis of stochastic biochemical systems Multiple Transcript Properties Related to Translation Affect mRNA Degradation Rates in Saccharomyces cerevisiae RNA Sequencing and Analysis Unstable transcripts in Arabidopsis allotetraploids are associated with nonadditive gene expression in response to abiotic and biotic stresses On the quest for selective constraints shaping the expressivity of the genes casting retropseudogenes in human A manganese-dependent ribozyme in the 3'-untranslated region of Xenopus Vg1 mRNA Evidence against the energetic cost hypothesis for the short introns in highly expressed genes mRNA turnover rate limits siRNA and microRNA efficacy NOVA-dependent regulation of cryptic NMD exons controls synaptic protein levels after seizure.Human Dendritic Cell Response Signatures Distinguish 1918, Pandemic, and Seasonal H1N1 Influenza Viruses.Transcriptional noise and cellular heterogeneity in mammalian macrophages.Genome-wide analysis of novel splice variants induced by topoisomerase I poisoning shows preferential occurrence in genes encoding splicing factors.Loss of the scavenger mRNA decapping enzyme DCPS causes syndromic intellectual disability with neuromuscular defects Integrative analysis of mRNA expression and half-life data reveals trans-acting genetic variants associated with increased expression of stable transcripts mRIN for direct assessment of genome-wide and gene-specific mRNA integrity from large-scale RNA-sequencing data.Measure transcript integrity using RNA-seq data Freeze-quenched maize mesophyll and bundle sheath separation uncovers bias in previous tissue-specific RNA-Seq data.A new efficient approach to fit stochastic models on the basis of high-throughput experimental data using a model of IRF7 gene expression as case study.Specific expression of lacZ and cre recombinase in fetal thymic epithelial cells by multiplex gene targeting at the Foxn1 locus.The transcription of MGAT4A glycosyl transferase is increased in white cells of peripheral blood of type 2 diabetes patients.Relative contribution of sequence and structure features to the mRNA binding of Argonaute/EIF2C-miRNA complexes and the degradation of miRNA targets.Modeling recursive RNA interference.Insights into the regulation of intrinsically disordered proteins in the human proteome by analyzing sequence and gene expression data.Rapid cross-linking of an RNA internal loop by the anticancer drug cisplatin IL-3 and oncogenic Abl regulate the myeloblast transcriptome by altering mRNA stability.

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P2860

Decay rates of human mRNAs: correlation with functional characteristics and sequence attributes.

http://www.wikidata.org/entity/Q38351806

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2003 nî lūn-bûn

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Decay rates of human mRNAs: co ...... stics and sequence attributes.

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Decay rates of human mRNAs: co ...... stics and sequence attributes.

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Decay rates of human mRNAs: co ...... stics and sequence attributes.

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Decay rates of human mRNAs: co ...... stics and sequence attributes.

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Edward Yang

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James E Darnell

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Marcelo Magnasco

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Mark Schroeder

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P2860

AU binding proteins recruit the exosome to degrade ARE-containing mRNAs

The mammalian exosome mediates the efficient degradation of mRNAs that contain AU-rich elements.

ARED: human AU-rich element-containing mRNA database reveals an unexpectedly diverse functional repertoire of encoded proteins

Genomic-scale measurement of mRNA turnover and the mechanisms of action of the anti-cancer drug flavopiridol

A conserved AU sequence from the 3' untranslated region of GM-CSF mRNA mediates selective mRNA degradation

Dissecting the regulatory circuitry of a eukaryotic genome

Genetic regulatory mechanisms in the synthesis of proteins

Identifying regulatory networks by combinatorial analysis of promoter elements

Finding DNA regulatory motifs within unaligned noncoding sequences clustered by whole-genome mRNA quantitation

Genetic regulatory mechanisms in the synthesis of proteins

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1863-1872

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10.1101/GR.1272403

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8

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13

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10627378

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