Optimization strategies for DNA microarray-based detection of bacteria with 16S rRNA-targeting oligonucleotide probes.
about
Different cDNA microarray patterns of gene expression reflecting changes during metastatic progression in adenoid cystic carcinomaPosition of the fluorescent label is a crucial factor determining signal intensity in microarray hybridizations.On-chip non-equilibrium dissociation curves and dissociation rate constants as methods to assess specificity of oligonucleotide probes.Application of phylogenetic microarrays to interrogation of human microbiotaMultiple simultaneous detection of Harmful Algal Blooms (HABs) through a high throughput bead array technology, with potential use in phytoplankton community analysisSignal processing for metagenomics: extracting information from the soup.Host specificity in marine sponge-associated bacteria, and potential implications for marine microbial diversity.Fingerprinting diazotroph communities in the Chesapeake Bay by using a DNA macroarrayUse of a suspension array for rapid identification of the varieties and genotypes of the Cryptococcus neoformans species complex.Composition of microbial communities in hexachlorocyclohexane (HCH) contaminated soils from Spain revealed with a habitat-specific microarray.Design of sphingomonad-detecting probes for a DNA array, and its application to investigate the behavior, distribution, and source of Rhizospherous sphingomonas and other sphingomonads inhabiting an acid sulfate soil paddock in Kalimantan, IndonesiaIdentification of human pathogens isolated from blood using microarray hybridisation and signal pattern recognition.Feasibility of transferring fluorescent in situ hybridization probes to an 18S rRNA gene phylochip and mapping of signal intensities.An efficient algorithm for the stochastic simulation of the hybridization of DNA to microarraysHigh taxonomic level fingerprint of the human intestinal microbiota by ligase detection reaction--universal array approach.Detection of tmRNA molecules on microarrays at low temperatures using helper oligonucleotidesIdentifying Fishes through DNA Barcodes and Microarrays.16S rRNA gene-based oligonucleotide microarray for environmental monitoring of the betaproteobacterial order "Rhodocyclales"Molecular Techniques for the Detection of Organisms in Aquatic Environments, with Emphasis on Harmful Algal Bloom Species.phylochipanalyser - a program for analysing hierarchical probe sets.Development of a rapid assay for determining the relative abundance of bacteria.Development and evaluation of genome-probing microarrays for monitoring lactic acid bacteria.Modeling formamide denaturation of probe-target hybrids for improved microarray probe design in microbial diagnostics.The human gut chip "HuGChip", an explorative phylogenetic microarray for determining gut microbiome diversity at family levelInfluence of the length of target DNA overhang proximal to the array surface on discrimination of single-base mismatches on a 25-mer oligonucleotide arrayMolecular biology-based methods for quantification of bacteria in mixed culture: perspectives and limitations.Single-stranded DNA catalyzes hybridization of PCR-products to microarray capture probesInfluence of dangling ends and surface-proximal tails of targets on probe-target duplex formation in 16S rRNA gene-based diagnostic arrays.Effects of target length on the hybridization efficiency and specificity of rRNA-based oligonucleotide microarraysDetection and genotyping of Entamoeba histolytica, Entamoeba dispar, Giardia lamblia, and Cryptosporidium parvum by oligonucleotide microarrayTentacle probes: eliminating false positives without sacrificing sensitivity.Identification of medically important Candida and non-Candida yeast species by an oligonucleotide arrayIdentification of non-specific hybridization using an empirical equation fitted to non-equilibrium dissociation curves.Simultaneous detection of multiple fish pathogens using a naked-eye readable DNA microarray.DNA methods for identification of Chinese medicinal materials.Challenges and opportunities for pathogen detection using DNA microarrays.A survey of the methods for the characterization of microbial consortia and communities.DNA microarrays for identifying fishesFeasibility of assessing the community composition of prasinophytes at the Helgoland Roads sampling site with a DNA microarray.The isotope array, a new tool that employs substrate-mediated labeling of rRNA for determination of microbial community structure and function.
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P2860
Optimization strategies for DNA microarray-based detection of bacteria with 16S rRNA-targeting oligonucleotide probes.
description
2003 nî lūn-bûn
@nan
2003年の論文
@ja
2003年学术文章
@wuu
2003年学术文章
@zh-cn
2003年学术文章
@zh-hans
2003年学术文章
@zh-my
2003年学术文章
@zh-sg
2003年學術文章
@yue
2003年學術文章
@zh
2003年學術文章
@zh-hant
name
Optimization strategies for DN ...... geting oligonucleotide probes.
@en
type
label
Optimization strategies for DN ...... geting oligonucleotide probes.
@en
prefLabel
Optimization strategies for DN ...... geting oligonucleotide probes.
@en
P2093
P2860
P1476
Optimization strategies for DN ...... geting oligonucleotide probes.
@en
P2093
Frank Oliver Glöckner
Jörg Peplies
Rudolf Amann
P2860
P304
P356
10.1128/AEM.69.3.1397-1407.2003
P407
P577
2003-03-01T00:00:00Z