Assembling large genomes with single-molecule sequencing and locality-sensitive hashing.
about
Mash: fast genome and metagenome distance estimation using MinHashPacBio Sequencing and Its ApplicationsGenetic variation and the de novo assembly of human genomesMajor Improvements to the Heliconius melpomene Genome Assembly Used to Confirm 10 Chromosome Fusion Events in 6 Million Years of Butterfly Evolution.Oxford Nanopore MinION Sequencing and Genome AssemblyGenotyping by sequencing approaches to characterise crop genomes: choosing the right tool for the right applicationA Portrait of Ribosomal DNA Contacts with Hi-C Reveals 5S and 45S rDNA Anchoring Points in the Folded Human GenomeComplete Genome Sequence of Edwardsiella piscicida Isolate S11-285 Recovered from Channel Catfish (Ictalurus punctatus) in Mississippi, USAGenome assembly from synthetic long read cloudsSynthetic long-read sequencing reveals intraspecies diversity in the human microbiomeComplete genome sequence of Pseudomonas azotoformans S4, a potential biocontrol bacteriumExcess of mutational jackpot events in expanding populations revealed by spatial Luria-Delbrück experiments.Contiguous and accurate de novo assembly of metazoan genomes with modest long read coverageDe Novo Genome and Transcriptome Assembly of the Canadian Beaver (Castor canadensis)Long-read, whole-genome shotgun sequence data for five model organismsBiological data sciences in genome research.Third generation sequencing technologies applied to diagnostic microbiology: benefits and challenges in applications and data analysis.Indel variant analysis of short-read sequencing data with Scalpel.Organelle_PBA, a pipeline for assembling chloroplast and mitochondrial genomes from PacBio DNA sequencing data.Improving and correcting the contiguity of long-read genome assemblies of three plant species using optical mapping and chromosome conformation capture data.-Genomic data mining of the marine actinobacteria Streptomyces sp. H-KF8 unveils insights into multi-stress related genes and metabolic pathways involved in antimicrobial synthesis.The combination of direct and paired link graphs can boost repetitive genome assembly.Annotated mitochondrial genome with Nanopore R9 signal for Nippostrongylus brasiliensis.Innovations and challenges in detecting long read overlaps: an evaluation of the state-of-the-artSingle-molecule sequencing resolves the detailed structure of complex satellite DNA loci in Drosophila melanogasterCanu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation.Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assemblySequencing and de novo assembly of a near complete indica rice genome.Complete Genome Sequence of Mycoplasma bovis Strain 08M.An improved assembly of the loblolly pine mega-genome using long-read single-molecule sequencingCharacterization of the whole chloroplast genome of Chikusichloa mutica and its comparison with other rice tribe (Oryzeae) species.Complete Genome Sequencing of Streptomyces sp. Strain MOE7, Which Produces an Extracellular Polysaccharide with Antioxidant and Antitumor Activities.Finding the Genomic Basis of Local Adaptation: Pitfalls, Practical Solutions, and Future Directions.de novo assembly and population genomic survey of natural yeast isolates with the Oxford Nanopore MinION sequencer.Complete Genome Sequence of Edwardsiella ictaluri Isolate RUSVM-1 Recovered from Nile Tilapia (Oreochromis niloticus) in the Western Hemisphere.Non-Toxin-Producing Bacillus cereus Strains Belonging to the B. anthracis Clade Isolated from the International Space Station.BioNanoAnalyst: a visualisation tool to assess genome assembly quality using BioNano data.Scaffolding of long read assemblies using long range contact information.Long-Read Single Molecule Sequencing to Resolve Tandem Gene Copies: The Mst77Y Region on the Drosophila melanogaster Y ChromosomeEvaluation and Validation of Assembling Corrected PacBio Long Reads for Microbial Genome Completion via Hybrid Approaches.
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Assembling large genomes with single-molecule sequencing and locality-sensitive hashing.
description
2015 nî lūn-bûn
@nan
2015年の論文
@ja
2015年論文
@yue
2015年論文
@zh-hant
2015年論文
@zh-hk
2015年論文
@zh-mo
2015年論文
@zh-tw
2015年论文
@wuu
2015年论文
@zh
2015年论文
@zh-cn
name
Assembling large genomes with single-molecule sequencing and locality-sensitive hashing.
@en
type
label
Assembling large genomes with single-molecule sequencing and locality-sensitive hashing.
@en
prefLabel
Assembling large genomes with single-molecule sequencing and locality-sensitive hashing.
@en
P2093
P2860
P50
P356
P1433
P1476
Assembling large genomes with single-molecule sequencing and locality-sensitive hashing.
@en
P2093
James P Drake
Jane M Landolin
Konstantin Berlin
P2860
P2888
P304
P356
10.1038/NBT.3238
P577
2015-05-25T00:00:00Z
P6179
1040313779