Bridging the gap between stochastic and deterministic regimes in the kinetic simulations of the biochemical reaction networks.
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Models for synthetic biologyMathematical Modeling and Dynamic Simulation of Metabolic Reaction Systems Using Metabolome Time Series DataSynthetic biology and regulatory networks: where metabolic systems biology meets control engineeringAccurate hybrid stochastic simulation of a system of coupled chemical or biochemical reactionsA method for efficient calculation of diffusion and reactions of lipophilic compounds in complex cell geometryDirect solution of the Chemical Master Equation using quantized tensor trainsStochastic chemical kinetics : A review of the modelling and simulation approachesMultiscale Hy3S: hybrid stochastic simulation for supercomputers.Synthetic tetracycline-inducible regulatory networks: computer-aided design of dynamic phenotypes.FERN - a Java framework for stochastic simulation and evaluation of reaction networks.Stochastic simulations of the tetracycline operonKinetic modeling of biological systems.Stochastic simulations of the origins and implications of long-tailed distributions in gene expressionComputational approaches for modeling regulatory cellular networks.Stochastic models for regulatory networks of the genetic toggle switch.A "partitioned leaping" approach for multiscale modeling of chemical reaction dynamics.How phosphotransferase system-related protein phosphorylation regulates carbohydrate metabolism in bacteriaElimination of fast variables in chemical Langevin equationsHybrid stochastic simulations of intracellular reaction-diffusion systemsRegulation by transcription factors in bacteria: beyond descriptionMUFINS: multi-formalism interaction network simulator.Computational modelling folate metabolism and DNA methylation: implications for understanding health and ageing.An equation-free probabilistic steady-state approximation: dynamic application to the stochastic simulation of biochemical reaction networks.Quantifying stochastic effects in biochemical reaction networks using partitioned leaping.Markov Chain modeling of pyelonephritis-associated pili expression in uropathogenic Escherichia coli.Transition from stochastic to deterministic behavior in calcium oscillations.QSSPN: dynamic simulation of molecular interaction networks describing gene regulation, signalling and whole-cell metabolism in human cellsBiochemical simulations: stochastic, approximate stochastic and hybrid approaches.Necessary conditions for the emergence of homochirality via autocatalytic self-replication.On the origins of approximations for stochastic chemical kinetics.Multivariate moment closure techniques for stochastic kinetic models.Adaptive hybrid simulations for multiscale stochastic reaction networks.Spino-dendritic cross-talk in rodent Purkinje neurons mediated by endogenous Ca2+-binding proteins.Network Analyses in Plant Pathogens.Stochastic analysis of complex reaction networks using binomial moment equations.Binomial distribution based tau-leap accelerated stochastic simulation.Validity of rate equation results for reaction rates in reaction networks with fluctuations.Eliminating fast reactions in stochastic simulations of biochemical networks: a bistable genetic switch."All possible steps" approach to the accelerated use of Gillespie's algorithm.Multinomial tau-leaping method for stochastic kinetic simulations.
P2860
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P2860
Bridging the gap between stochastic and deterministic regimes in the kinetic simulations of the biochemical reaction networks.
description
2004 nî lūn-bûn
@nan
2004年の論文
@ja
2004年論文
@yue
2004年論文
@zh-hant
2004年論文
@zh-hk
2004年論文
@zh-mo
2004年論文
@zh-tw
2004年论文
@wuu
2004年论文
@zh
2004年论文
@zh-cn
name
Bridging the gap between stoch ...... biochemical reaction networks.
@en
type
label
Bridging the gap between stoch ...... biochemical reaction networks.
@en
prefLabel
Bridging the gap between stoch ...... biochemical reaction networks.
@en
P2860
P1433
P1476
Bridging the gap between stoch ...... biochemical reaction networks
@en
P2093
Jacek Puchałka
P2860
P304
P356
10.1016/S0006-3495(04)74207-1
P407
P577
2004-03-01T00:00:00Z