about
Three-stage quality control strategies for DNA re-sequencing dataHigh-throughput sequencing in mitochondrial DNA researchAn analysis of enzyme kinetics data for mitochondrial DNA strand termination by nucleoside reverse transcription inhibitorsEnzyme kinetics of the mitochondrial deoxyribonucleoside salvage pathway are not sufficient to support rapid mtDNA replicationEvaluating purifying selection in the mitochondrial DNA of various mammalian speciesUnique mitochondrial DNA in highly inbred feral cattleNo evidence of an association between mitochondrial DNA variants and osteoarthritis in 7393 cases and 5122 controls.The effect of strand bias in Illumina short-read sequencing dataFinding the lost treasures in exome sequencing data.Large scale comparison of gene expression levels by microarrays and RNAseq using TCGA data.Multi-perspective quality control of Illumina exome sequencing data using QC3.Mitochondria sequence mapping strategies and practicability of mitochondria variant detection from exome and RNA sequencing data.Somatic mitochondrial DNA mutations in cancer escape purifying selection and high pathogenicity mutations lead to the oncocytic phenotype: pathogenicity analysis of reported somatic mtDNA mutations in tumors.Multi-perspective quality control of Illumina RNA sequencing data analysis.Analysis of enzyme kinetic data for mtDNA replication.Cerebrospinal fluid (CSF) biomarkers of iron status are associated with CSF viral load, antiretroviral therapy, and demographic factors in HIV-infected adults.Adult-onset spinocerebellar ataxia syndromes due to MTATP6 mutationsHigh proportion of heteroresistance in gyrA and gyrB in fluoroquinolone-resistant Mycobacterium tuberculosis clinical isolatesOPA1 mutations cause cytochrome c oxidase deficiency due to loss of wild-type mtDNA molecules.Genetic variation in iron metabolism is associated with neuropathic pain and pain severity in HIV-infected patients on antiretroviral therapy.Replication pauses of the wild-type and mutant mitochondrial DNA polymerase gamma: a simulation study.Mitochondrial haplogroups are associated with severity of diabetic retinopathy.Mitochondrial DNA deletions are associated with non-B DNA conformationsNon-random mtDNA segregation patterns indicate a metastable heteroplasmic segregation unit in m.3243A>G cybrid cells.Segregation of mtDNA throughout human embryofetal development: m.3243A>G as a model systemA reduction of mitochondrial DNA molecules during embryogenesis explains the rapid segregation of genotypes.Poor correlations in the levels of pathogenic mitochondrial DNA mutations in polar bodies versus oocytes and blastomeres in humans.Comparing phylogeny and the predicted pathogenicity of protein variations reveals equal purifying selection across the global human mtDNA diversity.Evidence for variable selective pressures at a large secondary structure of the human mitochondrial DNA control region.The effect of unhealthy β-cells on insulin secretion in pancreatic islets.Alternative applications for distinct RNA sequencing strategies.A review comparing deoxyribonucleoside triphosphate (dNTP) concentrations in the mitochondrial and cytoplasmic compartments of normal and transformed cellsMitochondrial aging is accelerated by anti-retroviral therapy through the clonal expansion of mtDNA mutationsEpidermal nerve fiber density, oxidative stress, and mitochondrial haplogroups in HIV-infected Thais initiating therapyIllumina human exome genotyping array clustering and quality controlEpigenetics, epidemiology and mitochondrial DNA diseases.The use of next generation sequencing technology to study the effect of radiation therapy on mitochondrial DNA mutation.Risk factors for symptomatic hyperlactatemia and lactic acidosis among combination antiretroviral therapy-treated adults in Botswana: results from a clinical trial.Mitochondrial DNA Haplogroups and Neurocognitive Impairment During HIV Infection.Improvements and impacts of GRCh38 human reference on high throughput sequencing data analysis.
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description
hulumtues
@sq
molecular physiologist
@en
wetenschapper
@nl
հետազոտող
@hy
name
David C Samuels
@ast
David C Samuels
@es
David C Samuels
@sl
David C. Samuels
@en
David C. Samuels
@nl
type
label
David C Samuels
@ast
David C Samuels
@es
David C Samuels
@sl
David C. Samuels
@en
David C. Samuels
@nl
prefLabel
David C Samuels
@ast
David C Samuels
@es
David C Samuels
@sl
David C. Samuels
@en
David C. Samuels
@nl
P108
P1053
A-5393-2008
P106
P21
P31
P3829
P496
0000-0003-3529-7791