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Semantic similarity in biomedical ontologiesSemantic similarity for automatic classification of chemical compoundsFacts from text--is text mining ready to deliver?The semantic web in translational medicine: current applications and future directionsFunctional coherence metrics in protein familiesDisjunctive shared information between ontology concepts: application to Gene OntologyEnhancement of chemical entity identification in text using semantic similarity validationThe CHEMDNER corpus of chemicals and drugs and its annotation principlesAutomatic background knowledge selection for matching biomedical ontologiesOn the usefulness of ontologies in epidemiology research and practiceKnowledge Representation and Management: a Linked Data Perspective.Finding genomic ontology terms in text using evidence content.Metrics for GO based protein semantic similarity: a systematic evaluationSerum proteomics signature of cystic fibrosis patients: a complementary 2-DE and LC-MS/MS approach.Enrichment analysis applied to disease prognosisPredicting the extension of biomedical ontologiesImproving chemical entity recognition through h-index based semantic similarity.Automatic concept recognition using the human phenotype ontology reference and test suite corpora.GRYFUN: a web application for GO term annotation visualization and analysis in protein sets.Ontology Alignment Repair through Modularization and Confidence-Based Heuristics.Extracting microRNA-gene relations from biomedical literature using distant supervision.The epidemiology ontology: an ontology for the semantic annotation of epidemiological resources.The next generation of similarity measures that fully explore the semantics in biomedical ontologies.Annotation extension through protein family annotation coherence metrics.Exploiting disjointness axioms to improve semantic similarity measures.Application of gene ontology to gene identification.GOAnnotator: linking protein GO annotations to evidence text.Chemical Entity Recognition and Resolution to ChEBI.Generating a Tolerogenic Cell Therapy Knowledge Graph from Literature.Assessing Public Metabolomics Metadata, Towards Improving Quality.Identifying Human Phenotype Terms by Combining Machine Learning and Validation Rules.Tackling the challenges of matching biomedical ontologies.Impact of translation on named-entity recognition in radiology texts.Accurate Filtering of Privacy-Sensitive Information in Raw Genomic Data.Semantic similarity over the gene ontologyMeasuring semantic similarity between Gene Ontology termsFriendsourcing the unmet needs of people with dementiaIdentifying bioentity recognition errors of rule-based text-mining systemsCarbohydrate-Active Enzymes Database: Principles and Classification of GlycosyltransferasesMolecular profiling of the human nasal epithelium: A proteomics approach
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hulumtues
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Francisco M. Couto
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Francisco M. Couto
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Francisco M. Couto
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Francisco M. Couto
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Francisco M. Couto
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