Ion-RNA interactions thermodynamic analysis of the effects of mono- and divalent ions on RNA conformational equilibria.
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Fluorescence-Based Strategies to Investigate the Structure and Dynamics of Aptamer-Ligand ComplexesMechanistic insights into temperature-dependent regulation of the simple cyanobacterial hsp17 RNA thermometer at base-pair resolution.Counting the ions surrounding nucleic acids.Single-Molecule FRET Reveals Three Conformations for the TLS Domain of Brome Mosaic Virus Genome.Dependence of RNA tertiary structural stability on Mg2+ concentration: interpretation of the Hill equation and coefficient.The osmolyte TMAO stabilizes native RNA tertiary structures in the absence of Mg2+: evidence for a large barrier to folding from phosphate dehydration.Salt contribution to RNA tertiary structure folding stabilityTBI server: a web server for predicting ion effects in RNA folding.RNA and its ionic cloud: solution scattering experiments and atomically detailed simulations.Electrostatics of nucleic acid folding under conformational constraintThermodynamic origins of monovalent facilitated RNA folding.Isothermal folding of G-quadruplexes.Denaturation of RNA secondary and tertiary structure by urea: simple unfolded state models and free energy parameters account for measured m-values.Effects of Mg2+ on the free energy landscape for folding a purine riboswitch RNA.Cation-Anion Interactions within the Nucleic Acid Ion Atmosphere Revealed by Ion Counting.Competitive interaction of monovalent cations with DNA from 3D-RISM.Secondary structure confirmation and localization of Mg2+ ions in the mammalian CPEB3 ribozyme.Quantifying the ion atmosphere of unfolded, single-stranded nucleic acids using equilibrium dialysis and single-molecule methods.Single-molecule kinetics reveal cation-promoted DNA duplex formation through ordering of single-stranded helicesIon counting from explicit-solvent simulations and 3D-RISM.Charge segregation and low hydrophobicity are key features of ribosomal proteins from different organisms.An RNA aptamer possessing a novel monovalent cation-mediated fold inhibits lysozyme catalysis by inhibiting the binding of long natural substrates.Principles of ion recognition in RNA: insights from the group II intron structures.Thermal Stability of RNA Structures with Bulky Cations in Mixed Aqueous Solutions.Roles of the amino group of purine bases in the thermodynamic stability of DNA base pairing.Model studies of the effects of intracellular crowding on nucleic acid interactions.Does Cation Size Affect Occupancy and Electrostatic Screening of the Nucleic Acid Ion Atmosphere?Comparison of interactions of diamine and Mg²⁺ with RNA tertiary structures: similar versus differential effects on the stabilities of diverse RNA folds.A remarkably stable kissing-loop interaction defines substrate recognition by the Neurospora Varkud Satellite ribozyme.Metal-ion rescue revisited: biochemical detection of site-bound metal ions important for RNA folding.Graph-distance distribution of the Boltzmann ensemble of RNA secondary structures.Hammerhead ribozyme activity and oligonucleotide duplex stability in mixed solutions of water and organic compounds.Many-body effect in ion binding to RNA.Single-Molecule Fluorescence Reveals Commonalities and Distinctions among Natural and in Vitro-Selected RNA Tertiary Motifs in a Multistep Folding Pathway.Long-range distance measurements on nucleic acids in cells by pulsed EPR spectroscopy.Modulation of the Thermodynamic Signatures of an RNA Thermometer by Osmolytes and Salts.
P2860
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P2860
Ion-RNA interactions thermodynamic analysis of the effects of mono- and divalent ions on RNA conformational equilibria.
description
2009 nî lūn-bûn
@nan
2009年の論文
@ja
2009年論文
@yue
2009年論文
@zh-hant
2009年論文
@zh-hk
2009年論文
@zh-mo
2009年論文
@zh-tw
2009年论文
@wuu
2009年论文
@zh
2009年论文
@zh-cn
name
Ion-RNA interactions thermodyn ...... RNA conformational equilibria.
@en
type
label
Ion-RNA interactions thermodyn ...... RNA conformational equilibria.
@en
prefLabel
Ion-RNA interactions thermodyn ...... RNA conformational equilibria.
@en
P2093
P2860
P1476
Ion-RNA interactions thermodyn ...... RNA conformational equilibria.
@en
P2093
David E Draper
Desirae Leipply
Dominic Lambert
P2860
P304
P356
10.1016/S0076-6879(09)69021-2
P407
P577
2009-11-17T00:00:00Z