SwarmDock and the use of normal modes in protein-protein docking.
about
Ligand Docking to Intermediate and Close-To-Bound Conformers Generated by an Elastic Network Model Based Algorithm for Highly Flexible ProteinsHuman and server docking prediction for CAPRI round 30-35 using LZerD with combined scoring functions.Inferring the microscopic surface energy of protein-protein interfaces from mutation data.Updates to the Integrated Protein-Protein Interaction Benchmarks: Docking Benchmark Version 5 and Affinity Benchmark Version 2.Computational docking of antibody-antigen complexes, opportunities and pitfalls illustrated by influenza hemagglutinin.The scoring of poses in protein-protein docking: current capabilities and future directionscNMA: a framework of encounter complex-based normal mode analysis to model conformational changes in protein interactions.How good is automated protein docking?The Entamoeba histolytica Dnmt2 homolog (Ehmeth) confers resistance to nitrosative stress.Multiscale modeling of macromolecular biosystems.Integrative computational modeling of protein interactions.Structural identification of an HER2 receptor model binding pocket to optimize lead compounds: a combined experimental and computational approach.IRaPPA: information retrieval based integration of biophysical models for protein assembly selection.Rigid-Docking Approaches to Explore Protein-Protein Interaction Space.New avenue in the treatment of temporal lobe epilepsy by classical anti-epileptics: A hypothetical establishment of executioner Caspase 3 inactivation by molecular modeling.The ClusPro web server for protein-protein docking.A machine learning approach for ranking clusters of docked protein-protein complexes by pairwise cluster comparison.Pushing the Backbone in Protein-Protein Docking.Optimization of protein-protein docking for predicting Fc-protein interactions.Functions of tryptophan residues in EWGWS insert of Plasmodium falciparum enolase.A new scoring function for protein-protein docking that identifies native structures with unprecedented accuracy.Expanding the frontiers of protein-protein modeling: from docking and scoring to binding affinity predictions and other challenges.Predicting protein conformational changes for unbound and homology docking: learning from intrinsic and induced flexibility.CyClus: a fast, comprehensive cylindrical interface approximation clustering/reranking method for rigid-body protein-protein docking decoys.Using the fast fourier transform in binding free energy calculations.LightDock: a new multi-scale approach to protein-protein docking.A Markov-chain model description of binding funnels to enhance the ranking of docked solutions.pyDock scoring for the new modeling challenges in docking: Protein-peptide, homo-multimers, and domain-domain interactions.Structural quality of unrefined models in protein docking.Elucidating Mechanisms of Molecular Recognition Between Human Argonaute and miRNA Using Computational Approaches.Improved flexible refinement of protein docking in CAPRI rounds 22-27.SwarmDock: a server for flexible protein-protein docking.Flexible protein docking refinement using pose-dependent normal mode analysis.An in silico study of the effect of SOD1 electrostatic loop dynamics on amyloid‑like filament formation.Next challenges in protein-protein docking: from proteome to interactome and beyondEfficient flexible backbone protein-protein docking for challenging targets
P2860
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P2860
SwarmDock and the use of normal modes in protein-protein docking.
description
2010 nî lūn-bûn
@nan
2010年の論文
@ja
2010年学术文章
@wuu
2010年学术文章
@zh-cn
2010年学术文章
@zh-hans
2010年学术文章
@zh-my
2010年学术文章
@zh-sg
2010年學術文章
@yue
2010年學術文章
@zh
2010年學術文章
@zh-hant
name
SwarmDock and the use of normal modes in protein-protein docking.
@en
type
label
SwarmDock and the use of normal modes in protein-protein docking.
@en
prefLabel
SwarmDock and the use of normal modes in protein-protein docking.
@en
P2860
P356
P1476
SwarmDock and the use of normal modes in protein-protein docking.
@en
P2860
P304
P356
10.3390/IJMS11103623
P407
P577
2010-09-28T00:00:00Z