IslandViewer 3: more flexible, interactive genomic island discovery, visualization and analysis.
about
Computational methods for predicting genomic islands in microbial genomesComparative Genomics of the Extreme Acidophile Acidithiobacillus thiooxidans Reveals Intraspecific Divergence and Niche AdaptationComparative genomics reveals Lysinibacillus sphaericus group comprises a novel speciesCRISPR System Acquisition and Evolution of an Obligate Intracellular Chlamydia-Related BacteriumNavigating Microbiological Food Safety in the Era of Whole-Genome SequencingEmergence and Evolution of Multidrug-Resistant Klebsiella pneumoniae with both blaKPC and blaCTX-M Integrated in Chromosome.Single-Molecule Sequencing (PacBio) of the Staphylococcus capitis NRCS-A Clone Reveals the Basis of Multidrug Resistance and Adaptation to the Neonatal Intensive Care Unit Environment.Fuerstia marisgermanicae gen. nov., sp. nov., an Unusual Member of the Phylum Planctomycetes from the German Wadden Sea.GenomeD3Plot: a library for rich, interactive visualizations of genomic data in web applications.Clinical utilization of genomics data produced by the international Pseudomonas aeruginosa consortiumThree Novel Species with Peptidoglycan Cell Walls form the New Genus Lacunisphaera gen. nov. in the Family Opitutaceae of the Verrucomicrobial Subdivision 4.Whole-Genome Sequencing of Seven Strains of Staphylococcus lugdunensis Allows Identification of Mobile Genetic Elements.Zisland Explorer: detect genomic islands by combining homogeneity and heterogeneity properties.Genome Sequencing of Ralstonia solanacearum CQPS-1, a Phylotype I Strain Collected from a Highland Area with Continuous Cropping of TobaccoA Syst-OMICS Approach to Ensuring Food Safety and Reducing the Economic Burden of Salmonellosis.Comparative genome and transcriptome analysis reveals distinctive surface characteristics and unique physiological potentials of Pseudomonas aeruginosa ATCC 27853Comparative Genome Analysis Provides Insights into Both the Lifestyle of Acidithiobacillus ferrivorans Strain CF27 and the Chimeric Nature of the Iron-Oxidizing Acidithiobacilli Genomes.Draft genome sequence of a multidrug-resistant beta-lactamase OXA-357-producing Acinetobacter pittii ST865 clinical isolate from ChinaDraft Genome Sequence of Aeromonas hydrophila Strain BSK-10 (Serotype O97), Isolated from Carassius carassius with Motile Aeromonad Septicemia in China.'ARMAN' archaea depend on association with euryarchaeal host in culture and in situ.Genome assembly of Chryseobacterium sp. strain IHBB 10212 from glacier top-surface soil in the Indian trans-Himalayas with potential for hydrolytic enzymesDraft genome sequences of strains Salinicola socius SMB35T, Salinicola sp. MH3R3-1 and Chromohalobacter sp. SMB17 from the Verkhnekamsk potash mining region of Russia.A Novel Method to Predict Genomic Islands Based on Mean Shift Clustering Algorithm.Comparative analysis of essential genes in prokaryotic genomic islands.Genomic analysis of the nitrate-respiring Sphingopyxis granuli (formerly Sphingomonas macrogoltabida) strain TFA.Identification of virulence factors and antibiotic resistance markers using bacterial genomics.Complete Genome Sequence of Acinetobacter baumannii Strain B8342, a Motility-Positive Clinical Isolate.The genome and genetics of a high oxidative stress tolerant Serratia sp. LCN16 isolated from the plant parasitic nematode Bursaphelenchus xylophilusWhen Genome-Based Approach Meets the "Old but Good": Revealing Genes Involved in the Antibacterial Activity of Pseudomonas sp. P482 against Soft Rot PathogensComparative Genome Analyses of Streptococcus suis Isolates from Endocarditis Demonstrate Persistence of Dual Phenotypic Clones.Evidence for an Opportunistic and Endophytic Lifestyle of the Bursaphelenchus xylophilus-Associated Bacteria Serratia marcescens PWN146 Isolated from Wilting Pinus pinaster.On the study of microbial transcriptomes using second- and third-generation sequencing technologies.Comparative Genomics and Metabolic Analysis Reveals Peculiar Characteristics of Rhodococcus opacus Strain M213 Particularly for Naphthalene DegradationGenomic and Evolutionary Analysis of Two Salmonella enterica Serovar Kentucky Sequence Types Isolated from Bovine and Poultry Sources in North America.The Genome of the Toluene-Degrading Pseudomonas veronii Strain 1YdBTEX2 and Its Differential Gene Expression in Contaminated Sand.Variable genetic architectures produce virtually identical molecules in bacterial symbionts of fungus-growing ants.Identification and analysis of genomic islands in Burkholderia cenocepacia AU 1054 with emphasis on pathogenicity islands.Genome sequencing and comparative analysis of an NDM-1-producing Klebsiella pneumoniae ST15 isolated from a refugee patient.Tripartite species interaction: eukaryotic hosts suffer more from phage susceptible than from phage resistant bacteria.No evidence for a bovine mastitis Escherichia coli pathotype
P2860
Q26746938-A240E8CF-264A-46E1-BCE3-21E70E35D2C9Q28828755-40C584A0-74B4-4A5D-9DB7-29AA146E2C16Q28831331-977203FA-F3E5-4B70-9A11-D0C58C3E536EQ28831366-0889F55B-4403-46C2-A99A-5A599897E33AQ30248315-CB36DFFF-C6C5-4802-BEF2-AF4E69669E23Q30401330-7B63EB15-2070-4EEF-863B-18DCDBE60F0EQ30832049-3560B35B-5C67-4343-AD8E-C40BBFEC5651Q30832738-C2D98590-16FE-4571-B94C-4AFD2C30CB93Q30975514-F715008B-9106-4A96-9E9E-E7F8455D6F89Q31008319-8F6017BC-A279-41F9-B096-8E23461EA1D5Q31167555-3E25C045-DB91-4CC4-95D8-4BDE89776743Q33658070-7CC21AED-04B4-455D-AE3D-5220B857BDD2Q33675315-D386E147-39B2-4B2C-8198-4574BC895FBDQ33740617-3FBDE875-29B5-41AB-A959-E6A32DFC8E80Q33753301-7F54E560-42D7-4EA8-9079-C7846E9B2BB0Q33786619-6103C067-4C53-4E66-8252-337EEF39DEC9Q33790049-38955ED2-16F7-4EC7-95AE-CA36FD1A708AQ33796579-DAAF7590-D814-4D6F-967C-9CBF3A4F91A6Q33806152-78FDB3DF-E85F-4D43-96D7-61985CC9C516Q33875673-DBBE578D-2A3B-4C30-A3F9-41DD615E2949Q33889729-1F02094D-064E-4CE1-8153-4243C7AFE42CQ33919432-4551CEAD-06E3-4F23-9400-2CF5D18345DCQ35885726-9C3BCF10-7DA6-489B-8E68-C6C1EA8CA5DFQ35902037-FD6F7CC0-03F8-435E-B393-409675BE8F93Q35915195-18CCFD86-B210-40BC-BA74-85311F68EE72Q35956049-40FAA3F1-CB74-4E26-B005-91F6BFB2B488Q35977735-BD264296-E8CE-40F4-8D85-DB1A557D22CAQ35997637-C2FDB910-7AD0-49E3-8475-89A18C662292Q36052595-0CB90804-C7D2-4F5C-B3EC-E1CE0A5639E6Q36081531-4F682614-409F-4204-B0BF-7760E1B562EAQ36086746-E2DB9025-7D5A-4C53-A61F-E2FF147B73F1Q36092013-F72AC222-9A95-4333-8303-98459313BAA5Q36105600-7C2DFDBA-0AD6-4327-AAD3-21AA60B76764Q36150912-63B24C36-BDBF-4547-99C7-03471B865EC2Q36182179-16144ED7-E8B5-4E0E-B52E-7456D1762568Q36238341-D49B0C27-2F10-4A3E-B2C8-EFE7491A2120Q36324439-4BD0D08B-589D-4184-8E27-1180688E4F23Q36342433-746BA0A7-9D9D-4B80-B015-ABA6F1C41184Q36343614-75345A25-C1E7-464D-B51C-B86BBE3F0EB5Q36366105-31BBFC6C-1117-4F30-BC4F-AD0E8A069111
P2860
IslandViewer 3: more flexible, interactive genomic island discovery, visualization and analysis.
description
2015 nî lūn-bûn
@nan
2015年の論文
@ja
2015年学术文章
@wuu
2015年学术文章
@zh-cn
2015年学术文章
@zh-hans
2015年学术文章
@zh-my
2015年学术文章
@zh-sg
2015年學術文章
@yue
2015年學術文章
@zh
2015年學術文章
@zh-hant
name
IslandViewer 3: more flexible, ...... y, visualization and analysis.
@en
type
label
IslandViewer 3: more flexible, ...... y, visualization and analysis.
@en
prefLabel
IslandViewer 3: more flexible, ...... y, visualization and analysis.
@en
P2093
P2860
P50
P356
P1476
IslandViewer 3: more flexible, ...... ry, visualization and analysis
@en
P2093
Bhavjinder K Dhillon
Fazmin Nizam
Fiona S L Brinkman
Julie A Shay
Nicholas Waglechner
Raymond Lo
Sheldon K Pereira
P2860
P304
P356
10.1093/NAR/GKV401
P577
2015-04-27T00:00:00Z