RNF: a general framework to evaluate NGS read mappers

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Simulating Next-Generation Sequencing Datasets from Empirical Mutation and Sequencing Models.FBB: a fast Bayesian-bound tool to calibrate RNA-seq aligners.SimBA: A methodology and tools for evaluating the performance of RNA-Seq bioinformatic pipelines

P2860

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P2860

RNF: a general framework to evaluate NGS read mappers

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2015 nî lūn-bûn

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2015年の論文

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2015年論文

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2015年論文

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2015年論文

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RNF: a general framework to evaluate NGS read mappers

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RNF: a general framework to evaluate NGS read mappers

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RNF: a general framework to evaluate NGS read mappers

@en

P1476

RNF: a general framework to evaluate NGS read mappers

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P2093

Karel Břinda

http://www.w3.org/2001/XMLSchema#string

P2860

SInC: an accurate and fast error-model based simulator for SNPs, Indels and CNVs coupled with a read generator for short-read sequence data

The Sequence Alignment/Map format and SAMtools

Comparison of mapping algorithms used in high-throughput sequencing: application to Ion Torrent data.

Systematic evaluation of spliced alignment programs for RNA-seq data

FASTQSim: platform-independent data characterization and in silico read generation for NGS datasets.

Characteristics of 454 pyrosequencing data--enabling realistic simulation with flowsim.

A novel and well-defined benchmarking method for second generation read mapping.

GemSIM: general, error-model based simulator of next-generation sequencing data.

ART: a next-generation sequencing read simulator.

Snakemake--a scalable bioinformatics workflow engine.

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136-139

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scholarly article

P356

10.1093/BIOINFORMATICS/BTV524

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English

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http://www.w3.org/2001/XMLSchema#string

P478

http://www.w3.org/2001/XMLSchema#string

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Valentina Boeva

Gregory Kucherov

Karel Břinda

P577

2015-09-09T00:00:00Z

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P5875

274403047

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26353839

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1504.00556

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P932

4681991

http://www.w3.org/2001/XMLSchema#string

RNF: a general framework to evaluate NGS read mappers

about

P2860

P2860

RNF: a general framework to evaluate NGS read mappers

description

name

type

label

prefLabel

P1433

P1476

P2093

P2860

P304

P31

P356

P407

P433

P478

P50

P577

P5875

P698

P818

P932

P356

P1433

P1476

P2093

P2860

P304

P31

P356

P407

P433

P478

P50

P577

P5875

P698

P818

P932