about
COPS: a sensitive and accurate tool for detecting somatic Copy Number Alterations using short-read sequence data from paired samplesComputational tools for copy number variation (CNV) detection using next-generation sequencing data: features and perspectivesLUMPY: a probabilistic framework for structural variant discovery.inGAP-sv: a novel scheme to identify and visualize structural variation from paired end mapping dataUsing ERDS to infer copy-number variants in high-coverage genomesIdentification of high-confidence somatic mutations in whole genome sequence of formalin-fixed breast cancer specimensDetection of Genomic Structural Variants from Next-Generation Sequencing DataGenomic analysis of diffuse intrinsic pontine gliomas identifies three molecular subgroups and recurrent activating ACVR1 mutationsCNVnator: an approach to discover, genotype, and characterize typical and atypical CNVs from family and population genome sequencingPeSV-Fisher: identification of somatic and non-somatic structural variants using next generation sequencing dataA genome-wide approach for detecting novel insertion-deletion variants of mid-range sizeThe Growing Importance of CNVs: New Insights for Detection and Clinical InterpretationNon-random DNA fragmentation in next-generation sequencing.MATE-CLEVER: Mendelian-inheritance-aware discovery and genotyping of midsize and long indelsSV-AUTOPILOT: optimized, automated construction of structural variation discovery and benchmarking pipelines.Identification of copy number variants in whole-genome data using Reference Coverage Profiles.Detecting non-allelic homologous recombination from high-throughput sequencing data.PSE-HMM: genome-wide CNV detection from NGS data using an HMM with Position-Specific Emission probabilities.SeqCNV: a novel method for identification of copy number variations in targeted next-generation sequencing data.Detection and reconstruction of tandemly organized de novo copy number variationsIdentification of structural variation in mouse genomes.Natural variation in genome architecture among 205 Drosophila melanogaster Genetic Reference Panel lines.Accurate and exact CNV identification from targeted high-throughput sequence data.CLOVE: classification of genomic fusions into structural variation eventscn.MOPS: mixture of Poissons for discovering copy number variations in next-generation sequencing data with a low false discovery rateA hidden Markov model for copy number variant prediction from whole genome resequencing data.Calling amplified haplotypes in next generation tumor sequence data.Common copy number variation detection from multiple sequenced samplesAn integrative probabilistic model for identification of structural variation in sequencing data.CONTRA: copy number analysis for targeted resequencing.Reconstructing cancer genomes from paired-end sequencing dataPAIR: polymorphic Alu insertion recognition.Sequencing depth and coverage: key considerations in genomic analyses.DB2: a probabilistic approach for accurate detection of tandem duplication breakpoints using paired-end reads.Unraveling overlapping deletions by agglomerative clustering.The mutation rate of mycobacterial repetitive unit loci in strains of M. tuberculosis from cynomolgus macaque infection.Comparative studies of copy number variation detection methods for next-generation sequencing technologiesCNV-TV: a robust method to discover copy number variation from short sequencing reads.Evaluating genome architecture of a complex region via generalized bipartite matchingEfficient algorithms for tandem copy number variation reconstruction in repeat-rich regions
P2860
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P2860
description
2010 nî lūn-bûn
@nan
2010年の論文
@ja
2010年論文
@yue
2010年論文
@zh-hant
2010年論文
@zh-hk
2010年論文
@zh-mo
2010年論文
@zh-tw
2010年论文
@wuu
2010年论文
@zh
2010年论文
@zh-cn
name
Detecting copy number variation with mated short reads.
@en
type
label
Detecting copy number variation with mated short reads.
@en
prefLabel
Detecting copy number variation with mated short reads.
@en
P2093
P2860
P356
P1433
P1476
Detecting copy number variation with mated short reads.
@en
P2093
Marc Fiume
Misko Dzamba
Paul Medvedev
P2860
P304
P356
10.1101/GR.106344.110
P577
2010-08-30T00:00:00Z