Environment-specific amino acid substitution tables: tertiary templates and prediction of protein folds.
about
Comparative modelling of barley-grain aspartic proteinase: A structural rationale for observed hydrolytic specificityDiscarding functional residues from the substitution table improves predictions of active sites within three-dimensional structuresInteraction of the p85 subunit of PI 3-kinase and its N-terminal SH2 domain with a PDGF receptor phosphorylation site: structural features and analysis of conformational changesSequence context-specific profiles for homology searchingKnowledge-based model building of proteins: concepts and examplesDiscriminative modelling of context-specific amino acid substitution probabilitiesHOMSTRAD: a database of protein structure alignments for homologous familiesKnowledge-Based Protein ModelingAmino-acid site variability among natural and designed proteinsPattern of amino acid substitutions in transmembrane domains of β-barrel membrane proteins for detecting remote homologs in bacteria and mitochondria.Solvent accessibility and purifying selection within proteins of Escherichia coli and Salmonella enterica.CODA: a combined algorithm for predicting the structurally variable regions of protein models.Sequence-structure homology recognition by iterative alignment refinement and comparative modeling.Alignment of protein sequences by their profilesStructural determinants of the rate of protein evolution in yeast.Parallel dynamics and evolution: Protein conformational fluctuations and assembly reflect evolutionary changes in sequence and structure.Recent advances in functional region prediction by using structural and evolutionary information - Remaining problems and future extensionsGenome bioinformatic analysis of nonsynonymous SNPsPredicting evolutionary site variability from structure in viral proteins: buriedness, packing, flexibility, and design.Functional site prediction selects correct protein models.Maintenance of a Protein Structure in the Dynamic Evolution of TIMPs over 600 Million YearsDissecting the roles of local packing density and longer-range effects in protein sequence evolutionOn the evolutionary conservation of hydrogen bonds made by buried polar amino acids: the hidden joists, braces and trusses of protein architecture.Redox biology: computational approaches to the investigation of functional cysteine residuesConstraints on HIV-1 diversity from protein structureCysteine function governs its conservation and degeneration and restricts its utilization on protein surfacesProtein sequence-similarity search acceleration using a heuristic algorithm with a sensitive matrix.SDM--a server for predicting effects of mutations on protein stability and malfunction.On the Relationship between Residue Structural Environment and Sequence Conservation in Proteins.Correlating disease-related mutations to their effect on protein stability: a large-scale analysis of the human proteome.Protein structural similarities predicted by a sequence-structure compatibility method.Derivation of rules for comparative protein modeling from a database of protein structure alignments.Mutational trends in V3 loop protein sequences observed in different genetic lineages of human immunodeficiency virus type 1.Issues in searching molecular sequence databases.Modeling coding-sequence evolution within the context of residue solvent accessibility.Independent effects of protein core size and expression on residue-level structure-evolution relationships.Role of the N-terminal region of the skeletal muscle myosin light chain kinase target sequence in its interaction with calmodulin.Derivation of an amino acid similarity matrix for peptide: MHC binding and its application as a Bayesian prior.Molecular Determinants of Mutant Phenotypes, Inferred from Saturation Mutagenesis DataSecondary structure assignment that accurately reflects physical and evolutionary characteristics.
P2860
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P2860
Environment-specific amino acid substitution tables: tertiary templates and prediction of protein folds.
description
1992 nî lūn-bûn
@nan
1992年の論文
@ja
1992年論文
@yue
1992年論文
@zh-hant
1992年論文
@zh-hk
1992年論文
@zh-mo
1992年論文
@zh-tw
1992年论文
@wuu
1992年论文
@zh
1992年论文
@zh-cn
name
Environment-specific amino aci ...... d prediction of protein folds.
@en
type
label
Environment-specific amino aci ...... d prediction of protein folds.
@en
prefLabel
Environment-specific amino aci ...... d prediction of protein folds.
@en
P2093
P2860
P356
P1433
P1476
Environment-specific amino aci ...... d prediction of protein folds.
@en
P2093
P2860
P304
P356
10.1002/PRO.5560010203
P577
1992-02-01T00:00:00Z