Metabolic flux elucidation for large-scale models using 13C labeled isotopes.
about
CeCaFDB: a curated database for the documentation, visualization and comparative analysis of central carbon metabolic flux distributions explored by 13C-fluxomicsSystematic evaluation of methods for integration of transcriptomic data into constraint-based models of metabolismA peptide-based method for 13C Metabolic Flux Analysis in microbial communitiesError Analysis and Propagation in Metabolomics Data Analysis.A Method to Constrain Genome-Scale Models with 13C Labeling Data.Estimation of flux ratios without uptake or release data: Application to serine and methionine metabolism.The topology of metabolic isotope labeling networks.Genome-scale models of bacterial metabolism: reconstruction and applications.Flux Design: In silico design of cell factories based on correlation of pathway fluxes to desired properties.Predicting outcomes of steady-state ¹³C isotope tracing experiments using Monte Carlo sampling.Toward biosynthetic design and implementation of Escherichia coli-derived paclitaxel and other heterologous polyisoprene compounds.OpenFLUX2: (13)C-MFA modeling software package adjusted for the comprehensive analysis of single and parallel labeling experimentsThe growing scope of applications of genome-scale metabolic reconstructions using Escherichia coli.The ability of flux balance analysis to predict evolution of central metabolism scales with the initial distance to the optimum.Refining carbon flux paths using atomic trace data.optGpSampler: an improved tool for uniformly sampling the solution-space of genome-scale metabolic networks.Estimating Metabolic Fluxes Using a Maximum Network Flexibility Paradigm.Experimental flux measurements on a network scalePrediction of metabolic fluxes from gene expression data with Huber penalty convex optimization function.Simultaneous tracing of carbon and nitrogen isotopes in human cellsRecent advances in artemisinin production through heterologous expression.Computational evaluation of cellular metabolic costs successfully predicts genes whose expression is deleterious.Mathematical modeling and synthetic biology.Elucidation of intrinsic biosynthesis yields using 13C-based metabolism analysis.Bridging the gap between fluxomics and industrial biotechnology.The benefits of being transient: isotope-based metabolic flux analysis at the short time scale.Eukaryotic metabolism: measuring compartment fluxes.Systematic applications of metabolomics in metabolic engineering.Central metabolic responses to the overproduction of fatty acids in Escherichia coli based on 13C-metabolic flux analysis.Optimization of 13C isotopic tracers for metabolic flux analysis in mammalian cellsCollisional fragmentation of central carbon metabolites in LC-MS/MS increases precision of ¹³C metabolic flux analysis.OpenFLUX: efficient modelling software for 13C-based metabolic flux analysis.An analytic approximation of the feasible space of metabolic networks.Elucidation of an alternate isoleucine biosynthesis pathway in Geobacter sulfurreducens.Two-Scale 13C Metabolic Flux Analysis for Metabolic Engineering.Construction of an E. Coli genome-scale atom mapping model for MFA calculations.Metabolic flux analysis of Escherichia coli MG1655 under octanoic acid (C8) stress.The metabolic flux phenotype of heterotrophic Arabidopsis cells reveals a flexible balance between the cytosolic and plastidic contributions to carbohydrate oxidation in response to phosphate limitation.
P2860
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P2860
Metabolic flux elucidation for large-scale models using 13C labeled isotopes.
description
2007 nî lūn-bûn
@nan
2007年の論文
@ja
2007年論文
@yue
2007年論文
@zh-hant
2007年論文
@zh-hk
2007年論文
@zh-mo
2007年論文
@zh-tw
2007年论文
@wuu
2007年论文
@zh
2007年论文
@zh-cn
name
Metabolic flux elucidation for large-scale models using 13C labeled isotopes.
@en
type
label
Metabolic flux elucidation for large-scale models using 13C labeled isotopes.
@en
prefLabel
Metabolic flux elucidation for large-scale models using 13C labeled isotopes.
@en
P2093
P2860
P1476
Metabolic flux elucidation for large-scale models using 13C labeled isotopes.
@en
P2093
Anthony P Burgard
Farnaz Nowroozi
Jay D Keasling
Madhukar S Dasika
Patrick F Suthers
Stephen Van Dien
P2860
P304
P356
10.1016/J.YMBEN.2007.05.005
P577
2007-05-29T00:00:00Z