Using enhanced sampling and structural restraints to refine atomic structures into low-resolution electron microscopy maps.
about
Extended Phase-Space Methods for Enhanced Sampling in Molecular Simulations: A ReviewUnraveling low-resolution structural data of large biomolecules by constructing atomic models with experiment-targeted parallel cascade selection simulations.Structural and biochemical characterization of the Cop9 signalosome CSN5/CSN6 heterodimerEquilibrium simulations of proteins using molecular fragment replacement and NMR chemical shifts.Computational Methodologies for Real-Space Structural Refinement of Large Macromolecular Complexes.Flexibility in the insulin receptor ectodomain enables docking of insulin in crystallographic conformation observed in a hormone-bound microreceptor.Conformational dynamics of a regulator of G-protein signaling protein reveals a mechanism of allosteric inhibition by a small molecule.Conformational changes in acetylcholine binding protein investigated by temperature accelerated molecular dynamics.Oncogenic mutations weaken the interactions that stabilize the p110α-p85α heterodimer in phosphatidylinositol 3-kinase α.Conformational Motions and Functionally Key Residues for Vitamin B12 Transporter BtuCD-BtuF Revealed by Elastic Network Model with a Function-Related Internal CoordinateTargeted conformational search with map-restrained self-guided Langevin dynamics: application to flexible fitting into electron microscopic density maps.Atomistic structural ensemble refinement reveals non-native structure stabilizes a sub-millisecond folding intermediate of CheY.Collective variable approaches for single molecule flexible fitting and enhanced sampling.Theoretical and computational studies of peptides and receptors of the insulin family.Single-particle cryo-electron microscopy of macromolecular complexes.Flexible fitting to cryo-EM density map using ensemble molecular dynamics simulations.Enhanced sampling and overfitting analyses in structural refinement of nucleic acids into electron microscopy mapsAll-atom structural models of insulin binding to the insulin receptor in the presence of a tandem hormone-binding element.Enhanced Sampling in Molecular Dynamics Using Metadynamics, Replica-Exchange, and Temperature-AccelerationSearching for 3D structural models from a library of biological shapes using a few 2D experimental images
P2860
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P2860
Using enhanced sampling and structural restraints to refine atomic structures into low-resolution electron microscopy maps.
description
2012 nî lūn-bûn
@nan
2012年の論文
@ja
2012年論文
@yue
2012年論文
@zh-hant
2012年論文
@zh-hk
2012年論文
@zh-mo
2012年論文
@zh-tw
2012年论文
@wuu
2012年论文
@zh
2012年论文
@zh-cn
name
Using enhanced sampling and st ...... tion electron microscopy maps.
@en
Using enhanced sampling and st ...... tion electron microscopy maps.
@nl
type
label
Using enhanced sampling and st ...... tion electron microscopy maps.
@en
Using enhanced sampling and st ...... tion electron microscopy maps.
@nl
prefLabel
Using enhanced sampling and st ...... tion electron microscopy maps.
@en
Using enhanced sampling and st ...... tion electron microscopy maps.
@nl
P2860
P1433
P1476
Using enhanced sampling and st ...... tion electron microscopy maps.
@en
P2093
Charles L Brooks
Harish Vashisth
P2860
P304
P356
10.1016/J.STR.2012.08.007
P577
2012-09-01T00:00:00Z