Comparative dynamic transcriptome analysis (cDTA) reveals mutual feedback between mRNA synthesis and degradation.
about
C2ORF29/CNOT11 and CNOT10 form a new module of the CCR4-NOT complexNext-generation analysis of gene expression regulation--comparing the roles of synthesis and degradationStructure and RNA-binding properties of the Not1-Not2-Not5 module of the yeast Ccr4-Not complexArchitecture of the RNA polymerase II-Mediator core initiation complexThe Modifier of Transcription 1 (Mot1) ATPase and Spt16 Histone Chaperone Co-regulate Transcription through Preinitiation Complex Assembly and Nucleosome Organization.Expression homeostasis during DNA replication.Engineered Covalent Inactivation of TFIIH-Kinase Reveals an Elongation Checkpoint and Results in Widespread mRNA StabilizationThe exosome component Rrp6 is required for RNA polymerase II termination at specific targets of the Nrd1-Nab3 pathwayRNA Sequencing and AnalysisKinetic analysis demonstrates a requirement for the Rat1 exonuclease in cotranscriptional pre-rRNA cleavage.Architecture of the RNA polymerase II-Paf1C-TFIIS transcription elongation complex.Estimating Gene Expression and Codon-Specific Translational Efficiencies, Mutation Biases, and Selection Coefficients from Genomic Data AloneInference of gene regulation functions from dynamic transcriptome data.Use of Bru-Seq and BruChase-Seq for genome-wide assessment of the synthesis and stability of RNAAlternative polyadenylation diversifies post-transcriptional regulation by selective RNA-protein interactions.Kinetic CRAC uncovers a role for Nab3 in determining gene expression profiles during stress.Poly(A)-tail profiling reveals an embryonic switch in translational control.Multiplexed gene control reveals rapid mRNA turnover.The embryo as a laboratory: quantifying transcription in Drosophila.Contributions of transcription and mRNA decay to gene expression dynamics of fission yeast in response to oxidative stress.The SAGA coactivator complex acts on the whole transcribed genome and is required for RNA polymerase II transcription.Determination of in vivo RNA kinetics using RATE-seq.MC EMiNEM maps the interaction landscape of the MediatorHeritable variation of mRNA decay rates in yeast.Yeast 14-3-3 protein functions as a comodulator of transcription by inhibiting coactivator functions.Transcriptome-wide analysis of trypanosome mRNA decay reveals complex degradation kinetics and suggests a role for co-transcriptional degradation in determining mRNA levels.SnapShot-Seq: a method for extracting genome-wide, in vivo mRNA dynamics from a single total RNA sampleDynamic remodeling of histone modifications in response to osmotic stress in Saccharomyces cerevisiaeSystematic analysis of the role of RNA-binding proteins in the regulation of RNA stability.Genome-wide quantification of 5'-phosphorylated mRNA degradation intermediates for analysis of ribosome dynamicsRole of Ccr4-Not complex in heterochromatin formation at meiotic genes and subtelomeres in fission yeastSplicing-Mediated Autoregulation Modulates Rpl22p Expression in Saccharomyces cerevisiae.Tracking Distinct RNA Populations Using Efficient and Reversible Covalent Chemistry.Control of mRNA Stability in Fungi by NMD, EJC and CBC Factors Through 3'UTR IntronsAnalysis of the association between codon optimality and mRNA stability in Schizosaccharomyces pombe.The CELF1 RNA-Binding Protein Regulates Decay of Signal Recognition Particle mRNAs and Limits Secretion in Mouse Myoblasts.The link between adjacent codon pairs and mRNA stability.The Rtr1p CTD phosphatase autoregulates its mRNA through a degradation pathway involving the REX exonucleases.Temporal and spatial characterization of nonsense-mediated mRNA decay.RNase J depletion leads to massive changes in mRNA abundance in Helicobacter pylori.
P2860
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P2860
Comparative dynamic transcriptome analysis (cDTA) reveals mutual feedback between mRNA synthesis and degradation.
description
2012 nî lūn-bûn
@nan
2012年の論文
@ja
2012年論文
@yue
2012年論文
@zh-hant
2012年論文
@zh-hk
2012年論文
@zh-mo
2012年論文
@zh-tw
2012年论文
@wuu
2012年论文
@zh
2012年论文
@zh-cn
name
Comparative dynamic transcript ...... RNA synthesis and degradation.
@en
Comparative dynamic transcriptome analysis
@nl
type
label
Comparative dynamic transcript ...... RNA synthesis and degradation.
@en
Comparative dynamic transcriptome analysis
@nl
prefLabel
Comparative dynamic transcript ...... RNA synthesis and degradation.
@en
Comparative dynamic transcriptome analysis
@nl
P2093
P2860
P356
P1433
P1476
Comparative dynamic transcript ...... RNA synthesis and degradation.
@en
P2093
Achim Tresch
Daniel Schulz
Kerstin C Maier
Laurent Larivière
Martin Seizl
Nicole Pirkl
Patrick Cramer
Stefanie Etzold
P2860
P304
P356
10.1101/GR.130161.111
P577
2012-03-30T00:00:00Z