CRX ChIP-seq reveals the cis-regulatory architecture of mouse photoreceptors. - Wikidata - wikimedia - TriplyDB

CRX ChIP-seq reveals the cis-regulatory architecture of mouse photoreceptors.

CRX ChIP-seq reveals the cis-regulatory architecture of mouse photoreceptors.

http://www.wikidata.org/entity/Q42398472

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The long noncoding RNA Vax2os1 controls the cell cycle progression of photoreceptor progenitors in the mouse retina Next generation sequencing technology and genomewide data analysis: Perspectives for retinal research Homeobox genes and melatonin synthesis: regulatory roles of the cone-rod homeobox transcription factor in the rodent pineal gland Biology and therapy of inherited retinal degenerative disease: insights from mouse models Epigenomic landscapes of retinal rods and cones Regulation of a novel isoform of Receptor Expression Enhancing Protein REEP6 in rod photoreceptors by bZIP transcription factor NRL A conserved regulatory logic controls temporal identity in mouse neural progenitors Cooperative activation of Xenopus rhodopsin transcription by paired-like transcription factors Multiple episodes of convergence in genes of the dim light vision pathway in bats Evolution of gene regulatory networks controlling body plan development Massively parallel cis-regulatory analysis in the mammalian central nervous system A general approach for discriminative de novo motif discovery from high-throughput data Large-scale quality analysis of published ChIP-seq data.Sterile alpha motif containing 7 (samd7) is a novel crx-regulated transcriptional repressor in the retina.Analysis of a gene regulatory cascade mediating circadian rhythm in zebrafish.arrEYE: a customized platform for high-resolution copy number analysis of coding and noncoding regions of known and candidate retinal dystrophy genes and retinal noncoding RNAs.Genetic architecture of retinal and macular degenerative diseases: the promise and challenges of next-generation sequencing.PRE-1, a cis element sufficient to enhance cone- and rod- specific expression in differentiating zebrafish photoreceptors Genomic approaches for the discovery of genes mutated in inherited retinal degeneration.Nonsense mutations in FAM161A cause RP28-associated recessive retinitis pigmentosa A highly efficient and effective motif discovery method for ChIP-seq/ChIP-chip data using positional information.Transcriptional regulation of rod photoreceptor homeostasis revealed by in vivo NRL targetome analysis Deletion of aryl hydrocarbon receptor AHR in mice leads to subretinal accumulation of microglia and RPE atrophy.Mechanisms of blindness: animal models provide insight into distinct CRX-associated retinopathies Massively parallel in vivo enhancer assay reveals that highly local features determine the cis-regulatory function of ChIP-seq peaks.Hybrid mice reveal parent-of-origin and Cis- and trans-regulatory effects in the retina Stage and gene specific signatures defined by histones H3K4me2 and H3K27me3 accompany mammalian retina maturation in vivo.Feedback induction of a photoreceptor-specific isoform of retinoid-related orphan nuclear receptor β by the rod transcription factor NRL.Predicting tissue specific transcription factor binding sites.Mechanistically distinct mouse models for CRX-associated retinopathy.Otx2 ChIP-seq reveals unique and redundant functions in the mature mouse retina Integrative analysis of circadian transcriptome and metabolic network reveals the role of de novo purine synthesis in circadian control of cell cycle Exome sequencing and cis-regulatory mapping identify mutations in MAK, a gene encoding a regulator of ciliary length, as a cause of retinitis pigmentosa.Common variants near FRK/COL10A1 and VEGFA are associated with advanced age-related macular degeneration.Chromatin accessibility mapping identifies mediators of basal transcription and retinoid-induced repression of OTX2 in medulloblastoma.The transcription factor neural retina leucine zipper (NRL) controls photoreceptor-specific expression of myocyte enhancer factor Mef2c from an alternative promoter.Transcriptional regulation of neural retina leucine zipper (Nrl), a photoreceptor cell fate determinant Vision from next generation sequencing: multi-dimensional genome-wide analysis for producing gene regulatory networks underlying retinal development, aging and disease Active opsin loci adopt intrachromosomal loops that depend on the photoreceptor transcription factor network.Graded gene expression changes determine phenotype severity in mouse models of CRX-associated retinopathies.

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P2860

CRX ChIP-seq reveals the cis-regulatory architecture of mouse photoreceptors.

http://www.wikidata.org/entity/Q42398472

description

2010 nî lūn-bûn

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2010年の論文

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2010年論文

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2010年論文

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2010年論文

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2010年論文

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2010年论文

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2010年论文

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2010年论文

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name

CRX ChIP-seq reveals the cis-regulatory architecture of mouse photoreceptors.

@en

CRX ChIP-seq reveals the cis-regulatory architecture of mouse photoreceptors.

@nl

type

label

CRX ChIP-seq reveals the cis-regulatory architecture of mouse photoreceptors.

@en

CRX ChIP-seq reveals the cis-regulatory architecture of mouse photoreceptors.

@nl

prefLabel

CRX ChIP-seq reveals the cis-regulatory architecture of mouse photoreceptors.

@en

CRX ChIP-seq reveals the cis-regulatory architecture of mouse photoreceptors.

@nl

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Genome Research

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CRX ChIP-seq reveals the cis-regulatory architecture of mouse photoreceptors.

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Bernhard H F Weber

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Connie A Myers

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Karin Weigelt

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Marcus Karlstetter

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Martin Seifert

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Musa Abdelaziz

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Thomas Langmann

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William Dirkes

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P2860

Transcription factors bind thousands of active and inactive regions in the Drosophila blastoderm

The leucine zipper of NRL interacts with the CRX homeodomain. A possible mechanism of transcriptional synergy in rhodopsin regulation

A conserved retina-specific gene encodes a basic motif/leucine zipper domain

Cone-rod dystrophy due to mutations in a novel photoreceptor-specific homeobox gene (CRX) essential for maintenance of the photoreceptor

Evolutionarily conserved elements in vertebrate, insect, worm, and yeast genomes.

A range of clinical phenotypes associated with mutations in CRX, a photoreceptor transcription-factor gene.

The human blue opsin promoter directs transgene expression in short-wave cones and bipolar cells in the mouse retina

Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data

An atlas of combinatorial transcriptional regulation in mouse and man

The UCSC Genome Browser Database: update 2009

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10.1101/GR.109405.110

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11

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20

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Lars G Fritsche

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Karen A Lawrence

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2010-08-06T00:00:00Z

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45538087

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20693478

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Photoreceptor protein

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2963815

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