HapCUT: an efficient and accurate algorithm for the haplotype assembly problem.
about
An extensive evaluation of read trimming effects on Illumina NGS data analysisThe second decade of 3C technologies: detailed insights into nuclear organizationAn Overview of Genome Organization and How We Got There: from FISH to Hi-CUsing familial information for variant filtering in high-throughput sequencing studiesViral quasispecies assembly via maximal clique enumerationFastHap: fast and accurate single individual haplotype reconstruction using fuzzy conflict graphsTranscriptome Sequencing of Diverse Peanut (Arachis) Wild Species and the Cultivated Species Reveals a Wealth of Untapped Genetic VariabilityInference of chromosome-specific copy numbers using population haplotypesHap-seq: an optimal algorithm for haplotype phasing with imputation using sequencing dataLeveraging reads that span multiple single nucleotide polymorphisms for haplotype inference from sequencing dataHapTree: a novel Bayesian framework for single individual polyplotyping using NGS data.Estimates of allele-specific expression in Drosophila with a single genome sequence and RNA-seq data.Extending partial haplotypes to full genome haplotypes using chromosome conformation capture data.Exploiting next-generation sequencing to solve the haplotyping puzzle in polyploids: a simulation study.Optimal algorithms for haplotype assembly from whole-genome sequence data.Tumor haplotype assembly algorithms for cancer genomics.Accurately annotate compound effects of genetic variants using a context-sensitive framework.Separating homeologs by phasing in the tetraploid wheat transcriptome.Accurate viral population assembly from ultra-deep sequencing data.Haplotype-resolved genome sequencing of a Gujarati Indian individual.Accurate HLA type inference using a weighted similarity graph.Strobe sequence design for haplotype assembly.Detection and correction of false segmental duplications caused by genome mis-assembly.Phased diploid genome assembly with single-molecule real-time sequencing.The role of replicates for error mitigation in next-generation sequencing.Inferring viral quasispecies spectra from 454 pyrosequencing reads.Haplotype reconstruction using perfect phylogeny and sequence data.Whole-genome haplotype reconstruction using proximity-ligation and shotgun sequencingHapCompass: a fast cycle basis algorithm for accurate haplotype assembly of sequence data.Contact genomics: scaffolding and phasing (meta)genomes using chromosome 3D physical signatures.A fast and accurate algorithm for single individual haplotyping.Whole-genome haplotyping approaches and genomic medicine.Combined genotype and haplotype tests for region-based association studies.Maximum parsimony xor haplotyping by sparse dictionary selection.HapEdit: an accuracy assessment viewer for haplotype assembly using massively parallel DNA-sequencing technologies.Mutations in SPRTN cause early onset hepatocellular carcinoma, genomic instability and progeroid featuresHybrid origins and the earliest stages of diploidization in the highly successful recent polyploid Capsella bursa-pastoris.Integrating dilution-based sequencing and population genotypes for single individual haplotyping.BamBam: genome sequence analysis tools for biologists.A comprehensively molecular haplotype-resolved genome of a European individual
P2860
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P2860
HapCUT: an efficient and accurate algorithm for the haplotype assembly problem.
description
2008 nî lūn-bûn
@nan
2008年の論文
@ja
2008年学术文章
@wuu
2008年学术文章
@zh-cn
2008年学术文章
@zh-hans
2008年学术文章
@zh-my
2008年学术文章
@zh-sg
2008年學術文章
@yue
2008年學術文章
@zh
2008年學術文章
@zh-hant
name
HapCUT: an efficient and accurate algorithm for the haplotype assembly problem.
@en
HapCUT: an efficient and accurate algorithm for the haplotype assembly problem.
@nl
type
label
HapCUT: an efficient and accurate algorithm for the haplotype assembly problem.
@en
HapCUT: an efficient and accurate algorithm for the haplotype assembly problem.
@nl
prefLabel
HapCUT: an efficient and accurate algorithm for the haplotype assembly problem.
@en
HapCUT: an efficient and accurate algorithm for the haplotype assembly problem.
@nl
P2860
P356
P1433
P1476
HapCUT: an efficient and accurate algorithm for the haplotype assembly problem.
@en
P2093
Vikas Bansal
P2860
P304
P356
10.1093/BIOINFORMATICS/BTN298
P407
P50
P577
2008-08-01T00:00:00Z