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The Plant Cell Wall-Decomposing Machinery Underlies the Functional Diversity of Forest FungiGenome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina)Genome sequence of the model mushroom Schizophyllum communeComparative genomics reveals mobile pathogenicity chromosomes in FusariumComparative genomics of citric-acid-producing Aspergillus niger ATCC 1015 versus enzyme-producing CBS 513.88Compartmentalized microchannel array for high-throughput analysis of single cell polarized growth and dynamics.Comprehensive Metabolomic, Lipidomic and Microscopic Profiling of Yarrowia lipolytica during Lipid Accumulation Identifies Targets for Increased LipogenesisGenome sequencing of the Trichoderma reesei QM9136 mutant identifies a truncation of the transcriptional regulator XYR1 as the cause for its cellulase-negative phenotypeAnaerobic fungi: NeocallimastigomycotaComparative genome sequence analysis underscores mycoparasitism as the ancestral life style of TrichodermaStructural reorganization of the fungal endoplasmic reticulum upon induction of mycotoxin biosynthesisTranscriptomic response of the mycoparasitic fungus Trichoderma atroviride to the presence of a fungal prey.Purifying selection and birth-and-death evolution in the class II hydrophobin gene families of the ascomycete Trichoderma/Hypocrea.Exploiting proteomic data for genome annotation and gene model validation in Aspergillus niger.Leucine Biosynthesis Is Involved in Regulating High Lipid Accumulation in Yarrowia lipolytica.Novel hydrophobins from Trichoderma define a new hydrophobin subclass: protein properties, evolution, regulation and processing.Extensive sampling of basidiomycete genomes demonstrates inadequacy of the white-rot/brown-rot paradigm for wood decay fungi.Comparative genomic analysis of the thermophilic biomass-degrading fungi Myceliophthora thermophila and Thielavia terrestris.Post-genomic approaches to understanding interactions between fungi and their environment.Comparative genome structure, secondary metabolite, and effector coding capacity across Cochliobolus pathogens.Biomarker candidate identification in Yersinia pestis using organism-wide semiquantitative proteomics.The Fusarium graminearum genome reveals a link between localized polymorphism and pathogen specialization.Genome, transcriptome, and secretome analysis of wood decay fungus Postia placenta supports unique mechanisms of lignocellulose conversion.Characterization of a polyketide synthase in Aspergillus niger whose product is a precursor for both dihydroxynaphthalene (DHN) melanin and naphtho-γ-pyroneDraft Genome Sequence of Neurospora crassa Strain FGSC 73.Rediscovery by Whole Genome Sequencing: Classical Mutations and Genome Polymorphisms in Neurospora crassa.Multi-omics analysis reveals regulators of the response to nitrogen limitation in Yarrowia lipolytica.Genome Sequence and Annotation of Trichoderma parareesei, the Ancestor of the Cellulase Producer Trichoderma reesei.The putative protein methyltransferase LAE1 controls cellulase gene expression in Trichoderma reesei.Expansion of Signal Transduction Pathways in Fungi by Extensive Genome DuplicationComparative genomics reveals high biological diversity and specific adaptations in the industrially and medically important fungal genus Aspergillus.Draft Genome Sequence of the Dimorphic Yeast Yarrowia lipolytica Strain W29.period-1 encodes an ATP-dependent RNA helicase that influences nutritional compensation of the Neurospora circadian clock.Identification of a Classical Mutant in the Industrial Host Aspergillus niger by Systems Genetics: LaeA Is Required for Citric Acid Production and Regulates the Formation of Some Secondary MetabolitesThe Genomes of Three Uneven Siblings: Footprints of the Lifestyles of Three Trichoderma Species.Genetic and genomic dissection of the Cochliobolus heterostrophus Tox1 locus controlling biosynthesis of the polyketide virulence factor T-toxin.Resin-assisted enrichment of N-terminal peptides for characterizing proteolytic processing.The polyketide synthase gene pks4 of Trichoderma reesei provides pigmentation and stress resistance.Structural analysis of N- and O-glycans using ZIC-HILIC/dialysis coupled to NMR detection.A molecular genetic toolbox for Yarrowia lipolytica
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P50
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hulumtues
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onderzoeker
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հետազոտող
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Scott E. Baker
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Scott E. Baker
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Scott E. Baker
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Scott E. Baker
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Scott E. Baker
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Scott E. Baker
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Scott E. Baker
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Scott E. Baker
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Scott E. Baker
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Scott E. Baker
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Scott E. Baker
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Scott E. Baker
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Scott E. Baker
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Scott E. Baker
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Scott E. Baker
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P1960
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P21
P31
P496
0000-0001-5085-3106