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Exploring functional relationships between components of the gene expression machinery.

Exploring functional relationships between components of the gene expression machinery.

http://www.wikidata.org/entity/Q46675062

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Multipotent genetic suppression of retrotransposon-induced mutations by Nxf1 through fine-tuning of alternative splicing The DEAD-box RNA helicase DDX3 associates with export messenger ribonucleoproteins as well as tip-associated protein and participates in translational control Human DDX3 functions in translation and interacts with the translation initiation factor eIF3 TFIID and Spt-Ada-Gcn5-acetyltransferase functions probed by genome-wide synthetic genetic array analysis using a Saccharomyces cerevisiae taf9-ts allele Early embryonic lethality of mice lacking the essential protein SNEV Analysis of a splice array experiment elucidates roles of chromatin elongation factor Spt4-5 in splicing Unusual intron conservation near tissue-regulated exons found by splicing microarrays.The Spt4-Spt5 complex: a multi-faceted regulator of transcription elongation Coupling between the DEAD-box RNA helicases Ded1p and eIF4A The Transcription Factor Spn1 Regulates Gene Expression via a Highly Conserved Novel Structural Motif Structure and Biological Importance of the Spn1-Spt6 Interaction, and Its Regulatory Role in Nucleosome Binding Role of the ubiquitin-like protein Hub1 in splice-site usage and alternative splicing Recruitment of mRNA cleavage/polyadenylation machinery by the yeast chromatin protein Sin1p/Spt2p.The DEAD-box helicase Ded1 from yeast is an mRNP cap-associated protein that shuttles between the cytoplasm and nucleus.Integration of a splicing regulatory network within the meiotic gene expression program of Saccharomyces cerevisiae The splicing factor Prp43p, a DEAH box ATPase, functions in ribosome biogenesis.The yeast transcription elongation factor Spt4/5 is a sequence-specific RNA binding protein.Prp43p is a DEAH-box spliceosome disassembly factor essential for ribosome biogenesis Toward a comprehensive temperature-sensitive mutant repository of the essential genes of Saccharomyces cerevisiae A single SR-like protein, Npl3, promotes pre-mRNA splicing in budding yeast.Histone H3K4 and K36 methylation, Chd1 and Rpd3S oppose the functions of Saccharomyces cerevisiae Spt4-Spt5 in transcription.Spn1 regulates the recruitment of Spt6 and the Swi/Snf complex during transcriptional activation by RNA polymerase II Multiple conformations are a conserved and regulatory feature of the RB1 5' UTR Classifying RNA-binding proteins based on electrostatic properties In vivo commitment to yeast cotranscriptional splicing is sensitive to transcription elongation mutants The zinc finger protein Zn72D and DEAD box helicase Belle interact and control maleless mRNA and protein levels Repression of RNA polymerase II elongation in vivo is critically dependent on the C-terminus of Spt5.Adventures in time and space: splicing efficiency and RNA polymerase II elongation rate Global analysis of positive and negative pre-mRNA splicing regulators in Drosophila.Specific splicing defects in S. pombe carrying a degron allele of the Survival of Motor Neuron gene Nuclear retention of unspliced pre-mRNAs by mutant DHX16/hPRP2, a spliceosomal DEAH-box protein.Accumulation of unstable promoter-associated transcripts upon loss of the nuclear exosome subunit Rrp6p in Saccharomyces cerevisiae.DNA Topoisomerases maintain promoters in a state competent for transcriptional activation in Saccharomyces cerevisiae Coordinated function of cellular DEAD-box helicases in suppression of viral RNA recombination and maintenance of viral genome integrity.Formation of a Trimeric Xpo1-Ran[GTP]-Ded1 Exportin Complex Modulates ATPase and Helicase Activities of Ded1 A genome-wide analysis indicates that yeast pre-mRNA splicing is predominantly posttranscriptional.Histone Chaperones Spt6 and FACT: Similarities and Differences in Modes of Action at Transcribed Genes MYBS: a comprehensive web server for mining transcription factor binding sites in yeast An integrated regulatory network reveals pervasive cross-regulation among transcription and splicing factors.Global analysis of mRNA splicing

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Exploring functional relationships between components of the gene expression machinery.

http://www.wikidata.org/entity/Q46675062

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2005 nî lūn-bûn

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Exploring functional relationships between components of the gene expression machinery.

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Exploring functional relationships between components of the gene expression machinery.

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Exploring functional relationships between components of the gene expression machinery.

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Exploring functional relationships between components of the gene expression machinery.

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Exploring functional relationships between components of the gene expression machinery.

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Exploring functional relationships between components of the gene expression machinery.

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Nature Structural & Molecular Biology

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Exploring functional relationships between components of the gene expression machinery

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Grant Hartzog

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Jean-Leon Chong

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Lily Shiue

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Roland Nagel

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Sharon Squazzo

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Tien-Hsien Chang

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Todd Burckin

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Yael Mandel-Gutfreund

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Gene ontology: tool for the unification of biology

TREX is a conserved complex coupling transcription with messenger RNA export

A nuclear cap binding protein complex involved in pre-mRNA splicing

A Sm-like protein complex that participates in mRNA degradation

Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation.

Stable mRNP formation and export require cotranscriptional recruitment of the mRNA export factors Yra1p and Sub2p by Hpr1p

The RNA polymerase II CTD kinase CTDK-I affects pre-mRNA 3' cleavage/polyadenylation through the processing component Pti1p.

Dual roles for Spt5 in pre-mRNA processing and transcription elongation revealed by identification of Spt5-associated proteins.

RNA polymerase II elongation factors of Saccharomyces cerevisiae: a targeted proteomics approach

A yeast cap binding protein complex (yCBC) acts at an early step in pre-mRNA splicing.

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175-182

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10.1038/NSMB891

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2

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12

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8030930

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15702072

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