PIPER: an FFT-based protein docking program with pairwise potentials.
about
Protein X of hepatitis B virus: origin and structure similarity with the central domain of DNA glycosylaseSH2B1β interacts with STAT3 and enhances fibroblast growth factor 1-induced gene expression during neuronal differentiationRole of the XPA protein in the NER pathway: A perspective on the function of structural disorder in macromolecular assemblyEvolution of Macromolecular Docking Techniques: The Case Study of Nickel and Iron Metabolism in Pathogenic BacteriaSampling and scoring: a marriage made in heavenG-actin guides p53 nuclear transport: potential contribution of monomeric actin in altered localization of mutant p53.HIV-1 receptor binding site-directed antibodies using a VH1-2 gene segment orthologue are activated by Env trimer immunizationATTRACT-EM: a new method for the computational assembly of large molecular machines using cryo-EM mapsThe role of distant mutations and allosteric regulation on LovD active site dynamicsB-Cell Epitopes in GroEL of Francisella tularensisProtein docking by the underestimation of free energy funnels in the space of encounter complexesTryptogalinin is a tick Kunitz serine protease inhibitor with a unique intrinsic disorderProtein-protein docking with F(2)Dock 2.0 and GB-rerankCharacterization of a Novel Putative S-Adenosylmethionine Decarboxylase-Like Protein from Leishmania donovaniEvidence of conformational selection driving the formation of ligand binding sites in protein-protein interfacesStructure- and modeling-based identification of the adenovirus E4orf4 binding site in the protein phosphatase 2A B55α subunitDockRank: Ranking docked conformations using partner-specific sequence homology-based protein interface predictionGPU-accelerated molecular modeling coming of ageDocking and molecular dynamics simulations of the Fyn-SH3 domain with free and phospholipid bilayer-associated 18.5-kDa myelin basic protein (MBP)-Insights into a noncanonical and fuzzy interaction.Adaptability in protein structures: structural dynamics and implications in ligand design.The T4 phage DNA mimic protein Arn inhibits the DNA binding activity of the bacterial histone-like protein H-NS.Computational modeling suggests dimerization of equine infectious anemia virus Rev is required for RNA binding.The impact of side-chain packing on protein docking refinementBiological function derived from predicted structures in CASP11.3D Structure, Dimerization Modeling, and Lead Discovery by Ligand-protein Interaction Analysis of p60 Transcription Regulator Protein (p60TRP).Human and server docking prediction for CAPRI round 30-35 using LZerD with combined scoring functions.InterPred: A pipeline to identify and model protein-protein interactions.Using 3dRPC for RNA-protein complex structure prediction.ARS-interacting multi-functional protein 1 induces proliferation of human bone marrow-derived mesenchymal stem cells by accumulation of β-catenin via fibroblast growth factor receptor 2-mediated activation of AktMolecular docking analysis of 2009-H1N1 and 2004-H5N1 influenza virus HLA-B*4405-restricted HA epitope candidates: implications for TCR cross-recognition and vaccine developmentMapping monomeric threading to protein-protein structure prediction.MEGADOCK: an all-to-all protein-protein interaction prediction system using tertiary structure data.US-SOMO HPLC-SAXS module: dealing with capillary fouling and extraction of pure component patterns from poorly resolved SEC-SAXS data.Trends in the Binding of Cell Penetrating Peptides to siRNA: A Molecular Docking Study.DrugScorePPI knowledge-based potentials used as scoring and objective function in protein-protein docking.Combination of scoring schemes for protein dockingFragment-based identification of druggable 'hot spots' of proteins using Fourier domain correlation techniques.Detection of ligand binding hot spots on protein surfaces via fragment-based methods: application to DJ-1 and glucocerebrosidase.FRODOCK: a new approach for fast rotational protein-protein docking.Structural interpretation of protein-protein interaction network.
P2860
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P2860
PIPER: an FFT-based protein docking program with pairwise potentials.
description
2006 nî lūn-bûn
@nan
2006年の論文
@ja
2006年学术文章
@wuu
2006年学术文章
@zh
2006年学术文章
@zh-cn
2006年学术文章
@zh-hans
2006年学术文章
@zh-my
2006年学术文章
@zh-sg
2006年學術文章
@yue
2006年學術文章
@zh-hant
name
PIPER: an FFT-based protein docking program with pairwise potentials.
@en
PIPER: an FFT-based protein docking program with pairwise potentials.
@nl
type
label
PIPER: an FFT-based protein docking program with pairwise potentials.
@en
PIPER: an FFT-based protein docking program with pairwise potentials.
@nl
prefLabel
PIPER: an FFT-based protein docking program with pairwise potentials.
@en
PIPER: an FFT-based protein docking program with pairwise potentials.
@nl
P2093
P356
P1433
P1476
PIPER: an FFT-based protein docking program with pairwise potentials.
@en
P2093
Ryan Brenke
Sandor Vajda
Stephen R Comeau
P304
P356
10.1002/PROT.21117
P407
P50
P577
2006-11-01T00:00:00Z
P5875
P698
P818
q-bio/0605018