Contribution of the closing base pair to exceptional stability in RNA tetraloops: roles for molecular mimicry and electrostatic factors.
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High-resolution reversible folding of hyperstable RNA tetraloops using molecular dynamics simulationsHigh-resolution NMR structure of an RNA model system: the 14-mer cUUCGg tetraloop hairpin RNARole of the closing base pair for d(GCA) hairpin stability: free energy analysis and folding simulations.Thermodynamic characterization of naturally occurring RNA tetraloopsUnusual loop-sequence flexibility of the proximal RNA replication element in EMCVRevisiting the association of cationic groove-binding drugs to DNA using a Poisson-Boltzmann approach.The nuclear magnetic resonance of CCCC RNA reveals a right-handed helix, and revised parameters for AMBER force field torsions improve structural predictions from molecular dynamics.Four small puzzles that Rosetta doesn't solve.Structure-guided mutational analysis of gene regulation by the Bacillus subtilis pbuE adenine-responsive riboswitch in a cellular context.Structural fidelity and NMR relaxation analysis in a prototype RNA hairpinEffects of non-nearest neighbors on the thermodynamic stability of RNA GNRA hairpin tetraloops.Sensitivities to parameterization in the size-modified Poisson-Boltzmann equation.Targeting non-B-form DNA in living cells.Stem-loop structures can effectively substitute for an RNA pseudoknot in -1 ribosomal frameshifting.Understanding in-line probing experiments by modeling cleavage of nonreactive RNA nucleotides.Structural and thermodynamic signatures that define pseudotriloop RNA hairpins.Effects of osmolytes on stable UUCG tetraloops and their preference for a CG closing base pair.Effects of osmolytes and macromolecular crowders on stable GAAA tetraloops and their preference for a CG closing base pair.
P2860
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P2860
Contribution of the closing base pair to exceptional stability in RNA tetraloops: roles for molecular mimicry and electrostatic factors.
description
2009 nî lūn-bûn
@nan
2009年の論文
@ja
2009年学术文章
@wuu
2009年学术文章
@zh
2009年学术文章
@zh-cn
2009年学术文章
@zh-hans
2009年学术文章
@zh-my
2009年学术文章
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2009年學術文章
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name
Contribution of the closing ba ...... cry and electrostatic factors.
@en
Contribution of the closing ba ...... cry and electrostatic factors.
@nl
type
label
Contribution of the closing ba ...... cry and electrostatic factors.
@en
Contribution of the closing ba ...... cry and electrostatic factors.
@nl
prefLabel
Contribution of the closing ba ...... cry and electrostatic factors.
@en
Contribution of the closing ba ...... cry and electrostatic factors.
@nl
P2093
P356
P1476
Contribution of the closing ba ...... icry and electrostatic factors
@en
P2093
David J Proctor
Narayanan Veeraraghavan
Philip C Bevilacqua
P304
P356
10.1021/JA900065E
P407
P577
2009-06-01T00:00:00Z