Toward realistic modeling of dynamic processes in cell signaling: quantification of macromolecular crowding effects.
about
A new coarse-grained model for E. coli cytoplasm: accurate calculation of the diffusion coefficient of proteins and observation of anomalous diffusionDiffusion, crowding & protein stability in a dynamic molecular model of the bacterial cytoplasmFrom microscopy data to in silico environments for in vivo-oriented simulations.A molecule-centered method for accelerating the calculation of hydrodynamic interactions in Brownian dynamics simulations containing many flexible biomolecules.Diffusion in crowded biological environments: applications of Brownian dynamics.Control of translation initiation: a model-based analysis from limited experimental dataPredicted functions of MdmX in fine-tuning the response of p53 to DNA damage.Genome scale modeling in systems biology: algorithms and resources.Protein-protein interactions in dilute to concentrated solutions: α-chymotrypsinogen in acidic conditions.Exploring the spatial and temporal organization of a cell's proteomeModels of macromolecular crowding effects and the need for quantitative comparisons with experiment.Crowding alone cannot account for cosolute effect on amyloid aggregationEffects of macromolecular crowding on intracellular diffusion from a single particle perspective.Nonparametric simulation of signal transduction networks with semi-synchronized updateComputational modeling of the interplay between cadherin-mediated cell adhesion and Wnt signaling pathwaySpatial simulations in systems biology: from molecules to cells.Effect of macromolecular crowding on reaction rates: a computational and theoretical study.Diffusion in cytoplasm: effects of excluded volume due to internal membranes and cytoskeletal structures.Computer Simulations of the Bacterial Cytoplasm.Reaching new levels of realism in modeling biological macromolecules in cellular environments.The shape of protein crowders is a major determinant of protein diffusionTheory of Crowding Effects on Bimolecular Reaction Rates.Influence of macromolecular crowding on protein-protein association rates--a Brownian dynamics study.A computational approach to increase time scales in Brownian dynamics-based reaction-diffusion modeling.Stochastic simulation of signal transduction: impact of the cellular architecture on diffusion.Validation of fractal-like kinetic models by time-resolved binding kinetics of dansylamide and carbonic anhydrase in crowded media.Self-assembly and plasticity of synaptic domains through a reaction-diffusion mechanism.Brownian dynamics simulations on CPU and GPU with BD_BOX.Diffusion of multiple species with excluded-volume effects.Diffusion-mediated geminate reactions under excluded volume interactions.Excluded-volume effects in the diffusion of hard spheres.Diffusion-limited reactions in crowded environments.Modeling somite scaling in small embryos in the framework of Turing patterns.An analytical correlated random walk model and its application to understand subdiffusion in crowded environment.
P2860
Q27312952-04736FD4-E85D-4778-B635-187C3CBF6BDCQ27335032-41F47016-2CAE-4948-85DE-2AD3FE6BCA1BQ30541093-F64E3F68-C3D2-44C4-AAB9-101E92FE5C0DQ30542038-4A1615EC-51D0-404C-8563-521599EDACCEQ31011555-D384AF11-663C-4015-A41F-2FC65DB4D439Q31159915-A36AE9C7-17A2-407D-9621-691D0AB2A232Q33533321-074944EC-9E67-4663-A542-10D6061EFDC8Q33565363-327E7BEE-3D2F-4B5F-9372-56F999337596Q33732547-01AEC8AB-855E-408D-A813-60E7A1E96865Q33752732-25D96D40-C2D5-4AC8-8347-78AB8D44399CQ33788048-A60B547C-E875-4857-9227-5B86C17EB024Q33798022-E853306C-FFC9-4466-A25C-C8E11B476719Q34213588-42EBF902-DB72-4C25-A074-5D78FE153686Q34318470-8C47C3C3-22D2-4FA9-B9FF-8056DF856EEBQ35195352-67F31942-3055-4CF1-8F4A-5147024D2451Q36097050-5DCFF791-B95F-4514-80F7-462CE1976A08Q37279196-19415F33-51CF-4B8B-BBD4-93F1E38B1F29Q37281911-F1030359-BEE6-4829-A6AD-C60B9BC514C7Q38126493-7EFE098C-959A-4873-8BC7-C1E77B40016FQ38137656-B1684D3F-57D3-41DD-822C-DD97111BF3ADQ39619083-68C5C4DD-2EC0-4F27-94E2-B2E2D6FEC5E3Q41571688-EC719D9C-B25E-49FB-97F1-DF20CDBAE9EBQ41668452-6B754ACD-C5E7-47AE-966F-465AC63D43BAQ42202219-32560E85-6993-4912-92B5-FC6150E25BC5Q42536834-003CC381-5F60-4228-A9E7-3E11A7B8F233Q42732966-AF6B2A2F-AF80-4BB4-BBA1-FA2005CB8D85Q45117421-F338EAB4-58B4-4C4E-9388-108DBDDD92CAQ51006180-09B2EE3A-4373-41BE-94A4-347EE291A0C0Q51293470-5FD2D3B7-D683-4B8B-9A86-52923FB607CEQ51407214-60D00E37-A4C4-45F9-8413-11B2B9F40A6EQ51407334-F2797B74-3CA0-4055-944C-362072C5A77CQ51656057-55FE5E5F-3A4E-4FE5-9560-D6EB01559D5BQ53101627-DFDFA355-1902-403C-B7E6-F74DB0016398Q54260021-12550E97-CB6D-4C4E-8CBA-46D4D05F46D1
P2860
Toward realistic modeling of dynamic processes in cell signaling: quantification of macromolecular crowding effects.
description
2007 nî lūn-bûn
@nan
2007年の論文
@ja
2007年学术文章
@wuu
2007年学术文章
@zh
2007年学术文章
@zh-cn
2007年学术文章
@zh-hans
2007年学术文章
@zh-my
2007年学术文章
@zh-sg
2007年學術文章
@yue
2007年學術文章
@zh-hant
name
Toward realistic modeling of d ...... cromolecular crowding effects.
@en
Toward realistic modeling of d ...... cromolecular crowding effects.
@nl
type
label
Toward realistic modeling of d ...... cromolecular crowding effects.
@en
Toward realistic modeling of d ...... cromolecular crowding effects.
@nl
prefLabel
Toward realistic modeling of d ...... cromolecular crowding effects.
@en
Toward realistic modeling of d ...... cromolecular crowding effects.
@nl
P2860
P356
P1476
Toward realistic modeling of d ...... cromolecular crowding effects.
@en
P2093
Harel Weinstein
P2860
P304
P356
10.1063/1.2789434
P407
P577
2007-10-01T00:00:00Z