about
Dual RNA-seq unveils noncoding RNA functions in host–pathogen interactionsGlobal RNA recognition patterns of post-transcriptional regulators Hfq and CsrA revealed by UV crosslinking in vivoRfam 11.0: 10 years of RNA familiesDominant role of nucleotide substitution in the diversification of serotype 3 pneumococci over decades and during a single infectionRobust identification of noncoding RNA from transcriptomes requires phylogenetically-informed samplingSignatures of adaptation in human invasive Salmonella Typhimurium ST313 populations from sub-Saharan Africa.HandAlign: Bayesian multiple sequence alignment, phylogeny and ancestral reconstructionA comparison of dense transposon insertion libraries in the Salmonella serovars Typhi and Typhimurium.Evolutionary modeling and prediction of non-coding RNAs in DrosophilaParallel independent evolution of pathogenicity within the genus Yersinia.Functional genomics reveals that Clostridium difficile Spo0A coordinates sporulation, virulence and metabolismRNA-seq reveals the RNA binding proteins, Hfq and RsmA, play various roles in virulence, antibiotic production and genomic flux in Serratia sp. ATCC 39006.The primary transcriptome of Neisseria meningitidis and its interaction with the RNA chaperone Hfq.RNA target profiles direct the discovery of virulence functions for the cold-shock proteins CspC and CspE.A high-resolution view of genome-wide pneumococcal transformationApproaches to querying bacterial genomes with transposon-insertion sequencingPatterns of genome evolution that have accompanied host adaptation in SalmonellaCharacterization of the yehUT two-component regulatory system of Salmonella enterica Serovar Typhi and Typhimurium.High-throughput analysis of gene essentiality and sporulation in Clostridium difficileThe TraDIS toolkit: sequencing and analysis for dense transposon mutant libraries.Resolving host-pathogen interactions by dual RNA-seq.xREI: a phylo-grammar visualization webserver.The in vitro and in vivo effects of constitutive light expression on a bioluminescent strain of the mouse enteropathogen Citrobacter rodentium.Genome and transcriptome adaptation accompanying emergence of the definitive type 2 host-restricted Salmonella enterica serovar Typhimurium pathovarDistinct Salmonella Enteritidis lineages associated with enterocolitis in high-income settings and invasive disease in low-income settings.Accelerating Discovery and Functional Analysis of Small RNAs with New Technologies.Molecular phenotyping of infection-associated small non-coding RNAs.The agr locus regulates virulence and colonization genes in Clostridium difficile 027.Role of sapA and yfgA in Susceptibility to Antibody-Mediated Complement-Dependent Killing and Virulence of Salmonella enterica Serovar Typhimurium.A profile-based method for identifying functional divergence of orthologous genes in bacterial genomes.Studying RNA Homology and Conservation with Infernal: From Single Sequences to RNA Families.RNIE: genome-wide prediction of bacterial intrinsic terminators.Morphological, genomic and transcriptomic responses of Klebsiella pneumoniae to the last-line antibiotic colistin.Machine learning identifies signatures of host adaptation in the bacterial pathogen Salmonella enterica.A global genomic approach uncovers novel components for twitching motility-mediated biofilm expansion in Pseudomonas aeruginosaFunctional analysis of Salmonella Typhi adaptation to survival in waterTranscriptional noise and exaptation as sources for bacterial sRNAsGlobal Maps of ProQ Binding In Vivo Reveal Target Recognition via RNA Structure and Stability Control at mRNA 3′ EndsRapid transcriptional responses to serum exposure are associated with sensitivity and resistance to antibody-mediated complement killing in invasive Salmonella Typhimurium ST313.Conditional Hfq Association with Small Noncoding RNAs in Pseudomonas aeruginosa Revealed through Comparative UV Cross-Linking Immunoprecipitation Followed by High-Throughput Sequencing
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P50
description
researcher
@en
wetenschapper
@nl
հետազոտող
@hy
name
Lars Barquist
@ast
Lars Barquist
@en
Lars Barquist
@es
Lars Barquist
@nl
Lars Barquist
@sl
type
label
Lars Barquist
@ast
Lars Barquist
@en
Lars Barquist
@es
Lars Barquist
@nl
Lars Barquist
@sl
prefLabel
Lars Barquist
@ast
Lars Barquist
@en
Lars Barquist
@es
Lars Barquist
@nl
Lars Barquist
@sl
P108
P106
P108
P1153
24484749700
P21
P2456
P31
P4012
P496
0000-0003-4732-2667